Pseudomonas aeruginosa NCGM2.S1: NCGM2_2972
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Entry
NCGM2_2972 CDS
T01974
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pnc
Pseudomonas aeruginosa NCGM2.S1
Brite
KEGG Orthology (KO) [BR:
pnc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnc03000
]
NCGM2_2972
Transcription factors [BR:
pnc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NCGM2_2972
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
Motif
Other DBs
NCBI-ProteinID:
BAK89820
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Position
1:complement(3165338..3166258)
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AA seq
306 aa
AA seq
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MTVKQLRAFLAVAQSLSFAQAGERLHLSQPALSLAIKSLEESLGGPLLERTTRSVSLTPE
GETLLPLALRLLADWDNTEELLRQHFTLQLGKVSIAAMPSFAGNLLPLVLKTFRERHPRV
NVAVHDVINEQVLEMVRNRRVELGIAFEPESLENLEFTPFYSDRFVAVVPTGSPLSGQER
ISWRELLGEPFITLQRPSAVRLLLEESVAAEHGRLPVAFESHQLVTVGRMVAQGLGVSAV
PTLCIQQMQELGARCLPLYAPQVQRRVGLLRLSEHKLSTAAQALSDVLLHGTDWRSLALP
QDQSTE
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcaagcagttgcgcgccttcctcgccgtggcgcagagcctcagcttcgcccag
gccggcgaacgcctgcacctctcccagccggccctgagcctggcgatcaagagcctggag
gaaagcctcggcggtccgctgctggaacgtaccacccgcagcgtcagcctcacccccgag
ggcgagaccctgctgccgctggcgctgcgcctgctggccgactgggacaataccgaggaa
ttgctgcgccagcacttcaccctgcaactgggcaaggtctccatcgccgccatgccctcc
ttcgccggcaacctgctgccgctggtcttgaagacctttcgcgaacgccacccgcgggtc
aacgtggcggtgcacgacgtgatcaacgagcaggtgctggagatggtccgcaaccgacgc
gtcgagctgggcatcgccttcgagccggagtccctggaaaacctcgagttcaccccgttc
tacagcgaccgcttcgtcgccgtggtgccgaccggctcgccgctgtccgggcaggagcgg
atcagttggcgcgaactgctcggcgagcccttcattaccctgcaacgcccctcggcggtg
cgcctgctcctggaagaaagcgtggccgccgagcacggccgcttgccggtggcgttcgag
agccaccaactggtcacggtcgggcggatggtcgcccagggactgggtgtcagcgccgtg
ccgaccctgtgcatccagcagatgcaggaactcggcgcgcgctgcctgccgctctacgcg
ccgcaggtgcagcgacgggtcggcctgctgcggctgagcgagcacaagctgtccaccgcc
gcccaggccctcagcgacgtgctgctgcatggcaccgactggcgctcgctggcgctgccg
caggaccagtccacggagtga
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