KEGG T01974: NCGM2

Pseudomonas aeruginosa NCGM2.S1: NCGM2_3369

Entry

NCGM2_3369        CDS       T01974

Symbol

sfnR

Name

(GenBank) putative transcriptional regulator

K11917

sigma-54 dependent transcriptional regulator

Organism

pnc Pseudomonas aeruginosa NCGM2.S1

Brite

KEGG Orthology (KO) [BR:pnc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pnc03000]
    NCGM2_3369 (sfnR)
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pnc02044]
    NCGM2_3369 (sfnR)
Transcription factors [BR:pnc03000]
Prokaryotic type
  Helix-turn-helix
   Other families
    NCGM2_3369 (sfnR)
Secretion system [BR:pnc02044]
Type VI secretion system
  Imp/Vas secretion system related proteins
   NCGM2_3369 (sfnR)

SSDB

Motif

Pfam:

Sigma54_activat Sigma54_activ_2 AAA_5 Mg_chelatase AAA_16 HTH_30 AAA_2 AAA HTH_8 bpMoxR DUF2089 FixP_N AAA_3

Other DBs

NCBI-ProteinID:

BAK90217

LinkDB

Position

1:complement(3604224..3605309)

AA seq 361 aa
MSVITHPHARELTKSVRATVLVFNDPRSRELLERIERLAPSEANALVIGETGTGKELVAR
HIHALSGRSGGPFVAVNCGAFAESLVESELFGHEKGAFTGALQSKAGWFEAANGGTLFLD
EIGDLPPSIQVKLLRVLQEREVVRLGSRRPIPIDVRLVAATNVDLADAVVAGHFREDLFY
RLHVATIQLPPLRERRGDILPLAEYFIVEHCRRLGYTSASLSPEAERKLLGHSWAGNIRE
LENAIHHALLVCRNRLIQPADLHLIDMRARQEPSGLRRAPESAAGSALEAALQALFEENR
EDLYEHIEETVFRAAYRFCHGNQLQTGRLLGISRNIVRARLEKIGELETSPRHNVVSLVG
K

NT seq 1086 nt +upstreamnt +downstreamnt
atgtccgtcatcacccatccccacgcccgcgagctgaccaaatcggtgcgcgccaccgtg
ctggtgttcaacgacccccgttcccgcgagctgctggagcgcatcgagcgcctggcgccc
agcgaggccaacgcgctggtcatcggcgagaccggcaccggtaaggagctggtggcgcgc
catatccatgccctcagcggacgcagcggcggcccgttcgtcgcggtcaactgcggtgct
ttcgccgagagcctggtggagagcgagctgttcggccacgagaagggcgcctttaccggt
gcgttgcagagcaaggccggctggttcgaggcggccaacggcggcaccttgttcctcgac
gagatcggcgacctgccgccgagcatccaggtcaagctgctgcgcgtgctgcaggagcgc
gaggtggtgcggctcggttcgcgccggccgatccccatcgacgtgcggctggtggcggcg
accaacgtcgacctggccgacgcggtggtcgccgggcacttccgcgaggacctgttctac
cgcctgcacgtggcgaccatccaactgccgccgttgcgcgagcgccgcggcgatatcctg
ccgctggccgagtacttcatcgtcgagcactgccggcgcctcggctacaccagcgcgagc
ctgagcccggaagccgagcgcaagctgctcgggcattcctgggcgggcaatatccgcgag
ctggagaacgccatccaccacgcgctgctggtctgccgcaaccgcctgatccagccggcc
gacctgcacctcatcgacatgcgtgcgcgccaggagccgagcggcttgcgccgcgccccc
gagagcgccgccggctcggcgctggaagcggcgctgcaggcactgttcgaggaaaaccgc
gaggatctctacgagcacatcgaggaaaccgtgttccgcgccgcctatcgcttctgccac
ggcaaccagttgcagaccggacgcctgctggggatcagccgcaacatcgtgcgcgcccgc
ctggagaagatcggcgagctggaaacctcgccacgacacaacgtggtctcgctggtgggc
aagtga

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