Pseudomonas aeruginosa NCGM2.S1: NCGM2_3376
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Entry
NCGM2_3376 CDS
T01974
Name
(GenBank) hypothetical protein
KO
K11900
type VI secretion system protein ImpC
Organism
pnc
Pseudomonas aeruginosa NCGM2.S1
Pathway
pnc02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pnc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NCGM2_3376
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pnc02044
]
NCGM2_3376
Secretion system [BR:
pnc02044
]
Type VI secretion system
Imp/Vas secretion system core components
NCGM2_3376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
BAK90224
LinkDB
All DBs
Position
1:3613747..3615231
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AA seq
494 aa
AA seq
DB search
MPKSSAAEQSGESSTQTLSLLDEIIAKGRMAHDDSQQDYARDMLAEFATQVLDEGMAVDK
DTVAMINDRISQIDALISDQLNQIIHHPELQKLEASWRGLHQLVSNTETSARLKLRLLNV
GKNELQNDLEKAVEFDQSALFKKIYEEEYGTFGGHPFSLLIGDFTFGRHPQDIGLLEKLS
NVAAAAHAPFIAAASPRLFDMNSFTELAVPRDLTKIFESLELIKWRAFRESEDSRYVSLV
LPNFLLRLPYGPETRPVEGMNYVEDVNGTDHSKYLWGNAAWVLAQRITEAFAKYGWCAAI
RGAEGGGAVEGLPAHTFRTSSGDLSLKCPTEVAITDRREKELNDLGFISLCHKKNSDVAV
FFGGQTTNKARLYNTNEANANARLSAMLPYVLAASRFAHYLKVIMRDKVGSFMTRDNVQT
YLNNWIADYVLINDNAPQEIKAQYPLREARVDVSEVAGKPGAYRATVFLRPHFQLEELSA
SIRLVANLPPPVAA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagtcatccgccgccgaacaatccggcgagagttcgacccagaccctgtccctg
ctcgacgagatcattgccaagggccgcatggcccacgacgacagccagcaggactacgcc
cgcgacatgctcgcggaattcgccacccaggtcctcgacgagggcatggccgtcgacaag
gacaccgtggcgatgatcaacgaccgcatcagccagatcgatgcgctgatcagcgaccag
ctcaaccagatcatccaccaccccgagttgcagaagctggaagcctcctggcgtggcctg
caccaactggtgagcaacaccgagaccagcgcgcggctcaagctgcgcctgctgaacgtc
ggcaagaacgaactgcagaacgatctggagaaggcggtcgagttcgaccagagcgcactg
ttcaagaagatctacgaagaggaatacggcaccttcggcggacaccccttcagcctgctg
atcggcgacttcaccttcggccgccatccgcaggacatcggcctgctggagaagctgtcg
aacgtcgccgcggctgcccacgcgccgttcatcgccgccgccagcccacgcctgttcgac
atgaacagcttcaccgaactggccgtgccgcgcgacctgaccaagatcttcgagagcctg
gagctgatcaagtggcgcgccttccgcgagagcgaggattcgcgctacgtgtccctggtg
ctgccgaacttcctcctgcgcctgccctacggcccggagacgcgaccggtggaaggcatg
aactatgtcgaggacgtcaacggcaccgaccactccaagtacctctggggcaacgccgcc
tgggtcctggcgcagcgcatcaccgaggccttcgccaagtacggctggtgcgcggcgatc
cgcggcgcggaaggcggcggcgcggtcgagggcctgccggcacacacgttccgcaccagc
tccggcgacctgtcgctgaagtgcccgaccgaggtggcgatcaccgaccgccgcgagaag
gaactcaacgatctcggcttcatttccctgtgccacaagaagaacagcgacgtggcggtg
ttcttcggcggccagaccaccaacaaggccaggctctacaacaccaacgaggccaacgcc
aacgcgcgcctgtcggcgatgctgccgtacgtgctggcggcatcgcgcttcgcccactac
ctgaaggtgatcatgcgcgacaaggtcggcagcttcatgacccgcgacaacgtgcagacc
tacctgaacaactggatcgccgactacgtgctgatcaacgacaacgcaccgcaggaaatc
aaggcgcagtacccgctgcgcgaggcgcgggtggatgtcagcgaggtggccggcaaaccg
ggggcctaccgcgccacggtgttcctccggccgcacttccagctcgaggaactcagcgcg
tcgatccgcctggtcgccaacctgccgccgccggtagcggcgtga
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