Pseudomonas aeruginosa NCGM2.S1: NCGM2_3942
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Entry
NCGM2_3942 CDS
T01974
Symbol
trpC
Name
(GenBank) putative outer membrane protein precursor
KO
K18904
outer membrane protein, multidrug efflux system
Organism
pnc
Pseudomonas aeruginosa NCGM2.S1
Brite
KEGG Orthology (KO) [BR:
pnc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnc02000
]
NCGM2_3942 (trpC)
Transporters [BR:
pnc02000
]
Other transporters
Pores ion channels [TC:
1
]
NCGM2_3942 (trpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
BAK90780
LinkDB
All DBs
Position
1:4270480..4271919
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AA seq
479 aa
AA seq
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MKGTPLLLIASLALGACSLGPDFTRPDRPAPGDWSLQAAAGNPSHLAAAPLAAQWWTLFD
DAQLNALLQRVQRANLDLRSAAARLQQSRAIRRSLGGDALPSVDASGNYQRQRTTSAGLF
DPSGKAGKGNYNHALAGFDASWELDFWGRVRRELEAADATVEASENELRDVQVSVLAEAA
RDYIQLRGEQSRAAIIRDNLETARRSLELTRTRLANGVATDLEVAQALAQVASMEARLPE
VEKNQAHLVNALGYLVGASPGSLLAELGPAREIPRPPGSVPVGLPSELAQRRPDIRRAEA
RLHAATASIGVAKADFYPRITLNGNFGFESLQLSSLGDWDHRQFAIGPAFSLPIFEGGRL
RGRLELREAQQQEAAIDYQRTVLRAWQEVDDAMHDYAANQRRQERLGEAVAQNRRALQSA
REQYRAGAVDFLSVLDSQRQLLDNQEQQVASDEAVSLTLVNLYKALGGGWSPTSDPASG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcactccgctcctgcttattgccagccttgcgctcggcgcctgcagcctcggt
cccgacttcacccgcccggaccgccctgcgcccggcgactggtcgctccaggccgctgcc
ggcaaccccagccacctcgccgccgcgccactcgcagcacaatggtggacgctgttcgac
gacgcgcaattgaacgccctgctgcaacgggtccagcgtgccaacctcgacctgcgcagc
gccgcggcgcgcctgcagcagagccgcgcgatccgtcgcagcctcggcggtgacgccctg
ccctcggtggacgccagcggcaactaccagcgccagcggaccaccagcgccggcctgttc
gatccttccggcaaggccggcaaaggcaactacaaccacgccctggccggcttcgacgcc
tcttgggagctggacttctggggccgcgtgcgacgcgagctggaagccgccgacgcgacg
gtggaagccagcgagaacgaactgcgcgacgtgcaggtctcggtgctggcggaagccgcg
cgcgactatatccagttgcgcggcgaacagagccgtgcggcgatcatccgtgacaacctc
gagaccgcacggcgcagcctggaactcacccgcacgcgcctggccaacggcgtcgccacc
gacctcgaggtagcccaggcgctggcccaggtggccagcatggaggcacgcctgcccgag
gtggaaaagaaccaggcgcacctggtcaacgcccttggctacctggtcggagccagcccc
ggcagcctgctcgccgaactcggcccggcgcgggagattccacgtccgccgggcagcgtg
ccggtcggcctgccgtccgaactggcccagcgccgccccgacatccgtcgtgccgaagcg
cgcctgcacgccgctaccgccagcatcggcgtggccaaggcggacttctatccgcgcatc
acgctcaacggcaacttcggtttcgaatccctgcaactgtccagcctgggcgactgggac
catcgccagttcgccatcggcccggcgttcagcctgccgatcttcgaaggcggacgcctg
cgcggacgcctggagctacgcgaggcacagcagcaggaagccgccatcgactaccagcgc
actgtgctgcgtgcctggcaggaagtcgacgacgcgatgcacgactacgccgccaaccag
cgccgccaggagcgcctcggcgaagccgtggcgcagaaccgccgcgccctgcagagcgcc
cgcgagcaataccgcgccggcgcggtggacttcctcagcgtgctcgacagccagcggcaa
ctgctggacaaccaggaacagcaggtcgccagcgacgaagcggtgtctctgaccctggtc
aacctctacaaggcgctgggcggcggctggagcccaacgtccgacccggcgtcgggctga
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