Pseudomonas aeruginosa NCGM2.S1: NCGM2_4269
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Entry
NCGM2_4269 CDS
T01974
Symbol
wbpM
Name
(GenBank) nucleotide sugar epimerase/dehydratase
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
pnc
Pseudomonas aeruginosa NCGM2.S1
Pathway
pnc00541
O-Antigen nucleotide sugar biosynthesis
pnc00552
Teichoic acid biosynthesis
pnc01100
Metabolic pathways
pnc01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pnc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NCGM2_4269 (wbpM)
00552 Teichoic acid biosynthesis
NCGM2_4269 (wbpM)
Enzymes [BR:
pnc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
NCGM2_4269 (wbpM)
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Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
CoA_binding_3
NAD_binding_4
adh_short
ApbA
KR
PglD_N
Motif
Other DBs
NCBI-ProteinID:
BAK91095
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Position
1:complement(4604041..4605903)
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AA seq
620 aa
AA seq
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MIDVFGEHAWLFITAPVIAIPLFIRFGMYRAVMRYLGNDALIAIAKAVTISALVLSLVVY
WYRGAPAPVPRSLVFNYWWLSMLLIGGLRLAMRQYFMGDWYSAVQSVPFLNRQDGLPRVA
IYGAGAAGNQLVAALRLGRAMRPVAFIDDDKQIANRVIAGLRVYTAKHIRQMIDETGAQE
VLLAIPSATRARRREILESLEPFPLHVRSMPGFMDLASGRVKVDDLQEVDIADLLGRDSV
APRKELLERCIRGQVVMVTGAGGSIGSELCRQIMSCSPSVLILFEHSEYNLYSIHQELER
RIKRESLSVNLLPILGSVRNPERLVDVMRTWKVNTVYHAAAYKHVPIVEHNIAEGVLNNV
IGTLHAVQAAVQVGVQNFVLISTDKAVRPTNVMGSTKRLAEMVLQALSNESAPVLFGDRK
DVHHVNKTRFTMVRFGNVLGSSGSVIPLFREQIKRGGPVTVTHPSITRYFMTIPEAAQLV
IQAGSMGQGGDVFVLDMGPPVKILELAEKMIHLSGLSVRSERSPHGDIAIEFSGLRPGEK
LYEELLIGDNVNPTDHPMIMRANEEHLSWEAFKVVLEQLLAAVEKDDYSRVRQLLRETVS
GYAPDGEIVDWIYRQRRREP
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgtgttcggcgagcatgcatggcttttcatcactgcgccggtcatcgccatt
ccactattcattcgcttcggcatgtatcgcgcggtgatgcgctatctcggtaacgacgca
ttgatcgccatcgccaaggcggtgaccatctcggctctggtgctgtcgctggtggtgtac
tggtatcgtggcgcgccggcgccggtgccgcgttccctggtgttcaactactggtggttg
agcatgctgctgatcggcggcttgcgtctggccatgcgccagtatttcatgggcgactgg
tactctgctgtgcagtcggtaccatttctcaatcgccaggatggcctgcccagggtggct
atctatggcgcgggggcggccggcaaccagttggttgcggcgttgcgtctcggtcgggcg
atgcgtccggtggcgttcatcgatgacgacaagcagatcgccaaccgggtcattgccggt
ctgcgggtctataccgccaagcatatccgccagatgatcgacgagacgggcgcgcaggag
gttctcctggcgattccttccgccactcgggcccggcgccgagagattctcgagtccctg
gagccgttcccgctgcacgtgcgcagcatgcccggcttcatggacctggccagcggccgg
gtcaaggtggacgacctgcaggaggtggacatcgctgacctgctggggcgcgacagcgtc
gcaccgcgcaaggagctgctggaacggtgcatccgcggtcaggtggtgatggtgaccggg
gcgggcggctctatcggttcggaactctgtcggcagatcatgagttgttcgcctagcgtg
ctgatcctgttcgagcacagcgaatacaacctctatagcatccatcaggaactggagcgt
cggatcaagcgcgagtcgctttcggtgaacctgttgccgatcctcggttcggtgcgcaat
cccgagcgcctggtggacgtgatgcgtacctggaaggtcaacaccgtctaccatgcggcg
gcctacaagcatgtgccgatcgtcgagcacaacatcgccgaaggcgttctcaacaacgtg
ataggcaccttgcatgcggtgcaggccgcggtgcaggtcggcgtgcagaacttcgtgctg
atttccaccgacaaggcggtgcggccgaccaatgtgatgggcagcaccaagcgcctggcg
gagatggtccttcaggcgctcagcaacgaatcggcgccggtgctgttcggcgaccggaag
gacgtgcatcacgtcaacaagacccgtttcaccatggtccgcttcggcaacgtcctcggt
tcgtccggctcggtcattccgctgttccgcgagcagatcaagcgcggcggcccggtgacg
gtcacccacccgagcatcacccgttacttcatgaccattcccgaggcggcgcagttggtc
atccaggccggttcgatggggcagggcggagatgtattcgtgctggacatggggccgccg
gtgaagatcctggagctcgccgagaagatgatccacctgtccggcctgagcgtgcgttcc
gagcgttcgccccatggtgacatcgccatcgagttcagtggcctgcgtcctggcgagaag
ctctacgaagagctgctgatcggtgacaacgtgaatcccaccgaccatccgatgatcatg
cgggccaacgaggaacacctgagctgggaggccttcaaggtcgtgctggagcagttgctg
gccgccgtggagaaggacgactactcgcgggttcgccagttgctgcgggaaaccgtcagc
ggctatgcgcctgacggtgaaatcgtcgactggatctatcgccagaggcggcgagaaccc
tga
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