Pseudomonas aeruginosa NCGM2.S1: NCGM2_4272
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Entry
NCGM2_4272 CDS
T01974
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pnc
Pseudomonas aeruginosa NCGM2.S1
Brite
KEGG Orthology (KO) [BR:
pnc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnc03032
]
NCGM2_4272 (ihfB)
03036 Chromosome and associated proteins [BR:
pnc03036
]
NCGM2_4272 (ihfB)
03400 DNA repair and recombination proteins [BR:
pnc03400
]
NCGM2_4272 (ihfB)
DNA replication proteins [BR:
pnc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCGM2_4272 (ihfB)
Chromosome and associated proteins [BR:
pnc03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
NCGM2_4272 (ihfB)
DNA repair and recombination proteins [BR:
pnc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
NCGM2_4272 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
CATASP
Motif
Other DBs
NCBI-ProteinID:
BAK91098
LinkDB
All DBs
Position
1:complement(4617625..4617909)
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AA seq
94 aa
AA seq
DB search
MTKSELIERIVTHQGQLSAKDVELAIKTMLEQMSQALATGDRIEIRGFGSFSLHYRAPRV
GRNPKTGESVRLDGKFVPHFKPGKELRDRVNEPE
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcggagttgatcgaacggatcgttacccatcaggggcaactgtccgcgaag
gatgtcgagttggcaatcaagaccatgctggagcaaatgtcccaggccctggcgaccggg
gaccggatcgagatccgtggcttcggcagcttttccttgcactaccgcgccccgcgcgtc
ggtcgcaaccccaagaccggggagtcggtacgcctcgacggcaagttcgtgccgcacttc
aagccgggcaaggagttgcgggatcgggtcaacgagccggaataa
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