Pseudomonas aeruginosa NCGM2.S1: NCGM2_4467
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Entry
NCGM2_4467 CDS
T01974
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pnc
Pseudomonas aeruginosa NCGM2.S1
Pathway
pnc00541
Biosynthesis of various nucleotide sugars
pnc01100
Metabolic pathways
pnc01250
Biosynthesis of nucleotide sugars
Module
pnc_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
pnc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NCGM2_4467 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pnc01005
]
NCGM2_4467 (rfaD)
Enzymes [BR:
pnc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
NCGM2_4467 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pnc01005
]
Core region
NCGM2_4467 (rfaD)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
DapB_N
Ldh_1_N
DUF1707
Motif
Other DBs
NCBI-ProteinID:
BAK91291
LinkDB
All DBs
Position
1:complement(4820872..4821864)
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AA seq
330 aa
AA seq
DB search
MSIIVTGAAGFIGSNLLQALNRRGETDIIAVDDLTDGEQFRNLADADIADYLDQNDFLER
YARGDFGTVRALFHQGACASTLESNGRYMMENNYRYSCRLLESSLELGVPFLYASSAAVY
GAGRTFREARQYERPLNVYGYSKFLFDQRVRRALPQARSQVVGLRYFNVYGPREEHKGRM
ASVAYHCYQQLRRDGRVELFGEHGGFPPGGHLRDFVAVEDVARVNLHFFDHPQRSGIFNL
GSGQARTFNEVALAVINSVRANADQPPLSLQQAVESGLLGYREFPESLRARYQSHTCADL
ELLREAGYRDDFQSLEEGVSGYCRWLARSA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcatcgtcaccggcgccgccggcttcatcggcagcaatctgctgcaggcgctg
aaccggcgcggcgagaccgacatcatcgcggtggacgatctcaccgacggcgagcagttc
cgcaacctggcggacgccgatatcgccgactacctggaccagaacgacttcctcgagcgc
tacgcccgcggcgacttcggcacggtccgcgcgctgttccaccagggcgcctgcgccagc
accctggaaagcaatggccgctacatgatggagaacaactaccgctacagttgccgcctg
ctggaaagcagcctggaactcggcgtgccgttcctctacgcctcgtcggcggcggtctac
ggcgccggccggaccttccgcgaggcgcgccagtacgagcggccgctgaacgtctacggc
tattccaagttcctcttcgaccagcgtgtgcggcgggcgctgccgcaggcgcgcagccag
gtggtcggcctgcgttacttcaacgtctacgggccgcgcgaggaacacaaggggcggatg
gcctcggtggcctaccactgctaccagcaattgcgccgcgacgggcgggtcgaactgttc
ggcgaacacggtggcttcccgcccggcggccacctgcgcgacttcgtcgcggtggaggac
gtggcgcgggtcaacctgcatttcttcgatcatccgcagcgttcgggaatcttcaacctc
ggcagcggccaggcgcggaccttcaacgaggtcgccctggcggtgatcaatagcgtccgc
gccaacgccgaccagccgcccctgtcgctgcaacaggccgtggaaagcggcctgctcggc
taccgcgagttccccgagtcgctgcgggcgcgctaccagagccatacctgcgccgacctg
gagctgctgcgcgaggcgggctaccgcgacgatttccagagcctggaagagggcgtctcc
ggctactgccgctggctggcgcgcagtgcctga
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