Pseudomonas aeruginosa NCGM2.S1: NCGM2_4543
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Entry
NCGM2_4543 CDS
T01974
Symbol
hasD
Name
(GenBank) transport protein
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
pnc
Pseudomonas aeruginosa NCGM2.S1
Pathway
pnc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pnc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NCGM2_4543 (hasD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnc02000
]
NCGM2_4543 (hasD)
02044 Secretion system [BR:
pnc02044
]
NCGM2_4543 (hasD)
Transporters [BR:
pnc02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
NCGM2_4543 (hasD)
Secretion system [BR:
pnc02044
]
Type I secretion system
Multiple protein transporter
NCGM2_4543 (hasD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_33
AAA_16
STAS
Zeta_toxin
AAA_30
AAA_29
AAA_22
AAA
NACHT
AAA_18
RsgA_GTPase
nSTAND3
Cpta_toxin
Motif
Other DBs
NCBI-ProteinID:
BAK91366
LinkDB
All DBs
Position
1:complement(4895586..4897376)
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AA seq
596 aa
AA seq
DB search
MKLRPASPRNEILATLGRFRPALRSVALFTAVINLLMLAPSLYMLQVYDRVLGSGNHMTL
LMLTLMVLGLYLLLGALEWVRSLVVIRLGGQLDMQLNQRIYDASFRASLERGEQAAGQAL
NDLTSLRQFLTGNALFAFFDAPWFPLYLLVIFLFSPWLGLLALAGALLLVLLAWVNESRS
REPLAEAGQLSILATQQASANLRQAETLAAMGMLPAMRARWFAQHQAFLARQNLGSERSA
AIGATSKGVRLALQSLVLGLGAWLAVEGLITPGMMIAGSILMGRVLSPIDQLIAVWRQWS
GARQAYQRLARLLEENPPAALGMPLPAPRGALRVERLCAAAPGREQVLLQDLGFALEPGE
ALGVIGPSGSGKSTLARLLVGAWQPLSGAVRLDGADLRQWSAAALGPHIGYLAQDVQLFA
GSIAENIARFAEVDAEKVVAAARLAGVHDLVLRLPQGYDTRLGDGGAGLSGGQRQRIGLA
RALYGRPALIVLDEPNASLDEAGEAALAEAIAAMRRQGSSLVLVTHKPAVLALTDKLLLL
HGGRLQRFGATAEVLASASPPAAAAPAPARQTPAFGFGYRPGPGMPVGGVPGGAAR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccggccggcctcgccgcgcaatgaaatcctcgccaccctcggccgcttccgc
ccggcgctgcgcagcgtcgcgctgttcaccgcggtgatcaacctgctgatgctggcgccg
tcgctgtacatgctgcaggtctacgaccgggtgctcggctccggcaaccacatgaccctg
ctgatgctgaccctcatggtgctcggcctctacctgctgctcggcgccctggagtgggtg
cgcagcctggtggtgatccgcctcggcggccagctcgacatgcaactcaaccagcgcatc
tacgacgcctccttccgcgccagcctggagcgcggcgagcaggccgccggacaggcgctg
aacgacctgaccagcctgcgccagttcctcaccggcaacgccctgttcgccttcttcgac
gcgccctggttcccgctctacctgctggtgatcttcctcttcagtccctggctcggcctg
ctcgccctggccggggcgctgctgctggtgctgctcgcctgggtcaacgaaagccgctcg
cgcgaaccgctggccgaggccgggcaactgtcgatcctcgccacccagcaggcctcggcc
aacctgcgccaggcggaaaccctggcggcaatgggcatgttgccggccatgcgcgcgcgc
tggttcgcccagcaccaggccttccttgcccggcagaacctcggcagcgagcgcagtgcg
gcgatcggcgcgacctccaagggcgtgcgcctggccttgcagtcgctggtgctcggcctc
ggcgcctggctggcggtggaaggcctgatcaccccggggatgatgatcgccggctcgatc
ctgatgggccgcgtgctcagccccatcgaccagttgatcgcggtctggcgccagtggagc
ggcgcgcggcaggcctaccagcggctggcgcggctgctcgaggagaatccgccggctgcc
ctgggcatgccgctgccggcgccgcgcggcgcgttgcgcgtcgagcggctctgcgcggcc
gcgccgggacgcgagcaggtattgttgcaggacctcggtttcgccctggagcctggcgaa
gcgctcggcgtgatcgggccgtccggttccggcaagtcgaccctggcgcgcttgctggtg
ggcgcctggcagccgctgtccggcgcggtgcgcttggacggcgccgacctgcggcagtgg
agcgcggcggcactggggccgcacatcggctacctggcccaggacgtgcaactgttcgcc
ggcagcatcgccgagaacatcgcgcgcttcgccgaggtggatgccgagaaggtggtggcg
gcagcgcgcctggccggcgtgcacgacctggtgctgcgcctgccgcagggctacgacacg
cgccttggcgacggcggcgccggactctccggcggccagcgccagcgcatcggcctggcc
cgcgcgctgtacgggcgaccggcgctgatcgtgctcgacgaacccaatgccagcctcgac
gaggcgggtgaggcggccctggccgaagccatcgcggcgatgcgccggcagggcagcagc
ctggtgctggtcacccacaagccggcggtgctggcgctgaccgacaagctgttgttgctg
catggcgggcgcctgcagcgtttcggcgcgaccgccgaggtgcttgccagcgcctcgccg
ccggccgctgcggccccggcgccggcacggcagacgccggcgttcggtttcggctaccgg
ccgggaccgggcatgccggtcggcggtgtgccgggaggagcggcgcgatga
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