Pseudomonas aeruginosa NCGM2.S1: NCGM2_5179
Help
Entry
NCGM2_5179 CDS
T01974
Name
(GenBank) hypothetical protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pnc
Pseudomonas aeruginosa NCGM2.S1
Brite
KEGG Orthology (KO) [BR:
pnc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnc03016
]
NCGM2_5179
Enzymes [BR:
pnc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
NCGM2_5179
Transfer RNA biogenesis [BR:
pnc03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
NCGM2_5179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
BAK92000
LinkDB
All DBs
Position
1:5557646..5558986
Genome browser
AA seq
446 aa
AA seq
DB search
MAKKLFIETHGCQMNEYDSSRMADLLGEHQALEVTENAAEADVILLNTCSIREKAQEKVF
SKLGMWRELKQQNPDLVIGVGGCVASQEGAAIRERAPYVDVVFGPQTLHRLPEMIDAARS
TRKPQVDVSFPEIEKFDRLPEPRVDGPTAFVSVMEGCSKYCSFCVVPYTRGEEVSRPFDD
VIAEVIHLAENGVREVTLLGQNVNGFRGLTHDGRLADFAELLRVVAAVDGIERIRYTTSH
PLEFSDALIQAHAEVPELVKFIHLPVQSGSDRVLAAMKRNHTVLEYKSRIRKLKAAVPDI
CISSDFIVGFPGETEKDFEQTMKLVEDVGFDFSFSFIYSARPGTPAADLADDLPEEVKKQ
RLQILQSRIHQQGYEISRRMVGSTQRILVTDFSKKDPGMLQGRTENNRIVNFRCDNPRLI
GQFAQVHIDDALPHSLRGTLIDSTLH
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagcttttcatcgaaacccacggctgccagatgaacgagtacgactcgtcg
cgaatggcggacctgctcggtgaacaccaagccctcgaggtgaccgaaaacgccgccgag
gccgacgtcatcctgctcaatacctgctcgatccgcgagaaggcccaggaaaaggtgttt
tccaagctcggcatgtggcgcgagctgaagcagcagaatcccgacctggtgatcggcgtc
ggcggctgcgtggccagccaggaaggcgccgcgatccgtgagcgcgcgccctatgtcgac
gtggtcttcggcccgcagaccctgcaccgcctgccggaaatgatcgacgccgcgcgcagc
acgcgcaagccgcaggtcgacgtgtccttcccggaaatcgagaaattcgaccgcctgccg
gaaccgcgggtcgatggccccaccgccttcgtctcggtgatggaaggctgcagcaagtac
tgcagcttctgcgtggtgccctacacccgcggcgaggaagtcagccgaccattcgacgac
gtgatcgccgaagtgatccacctggccgagaacggcgtccgcgaagtcaccctgctggga
cagaacgtcaacggcttccgtggcctgacccacgatggccgcctggccgacttcgccgaa
ctgctgcgggtggtcgccgccgtcgacggtatcgagcgcatccgctataccacctcgcac
ccgctggaattctccgacgcgctgatccaggcccacgccgaggtgccggagctggtgaaa
ttcatccacctgccggtgcagtcgggctccgaccgcgtgctggcggcgatgaagcgcaac
cataccgtgctggaatacaagtcgcgtatccgcaagctgaaggccgcggtaccggacatc
tgcatcagctccgacttcatcgtcggtttccccggcgaaaccgagaaggacttcgagcag
accatgaagctggtggaggacgtcggcttcgacttctccttctccttcatctacagcgcg
cggcccggcacgcccgccgccgacctcgccgacgacctgccggaagaagtgaagaaacag
cgcctgcagatcctccagagccgcatccaccagcaaggctacgagatcagccggcgcatg
gtcggcagcacccagcggatcctggtcaccgacttctcgaagaaggacccgggcatgctc
caggggcgtactgagaacaaccggatcgtcaacttccgctgcgacaatccacgcctgatc
ggccagttcgcccaggtgcacatcgacgacgcgctgccgcactcgctgcgcggcaccctg
atcgacagcaccctgcattga
DBGET
integrated database retrieval system
