Pseudomonas aeruginosa NCGM2.S1: NCGM2_5551
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Entry
NCGM2_5551 CDS
T01974
Symbol
vfr
Name
(GenBank) cAMP-regulatory protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pnc
Pseudomonas aeruginosa NCGM2.S1
Pathway
pnc02020
Two-component system
pnc02024
Quorum sensing
pnc02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pnc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCGM2_5551 (vfr)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCGM2_5551 (vfr)
02025 Biofilm formation - Pseudomonas aeruginosa
NCGM2_5551 (vfr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnc03000
]
NCGM2_5551 (vfr)
Transcription factors [BR:
pnc03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
NCGM2_5551 (vfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
TrmB
MarR
HVO_A0261_N
MarR_2
HTH_28
MltA
HTH_11
bAvd
GntR
HTH_Cmi2_C
HTH_24
Motif
Other DBs
NCBI-ProteinID:
BAK92363
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Position
1:5935377..5936021
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AA seq
214 aa
AA seq
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MVAITHTPKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGRE
MIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAEISYAKFRELSQQDSEILYT
LGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTHPDGMQIKITRQEIGRI
VGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGTR
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggtagctattacccacacacccaaactcaaacacctagacaagctgctcgcacactgt
caccgccgccgctacaccgcaaagagcaccatcatctatgccggcgatcgctgcgaaacg
ctgttcttcatcatcaagggttcggtcaccatcctcatcgaggacgacgacggccgcgaa
atgatcatcggctacctcaacagcggtgatttcttcggcgagctgggattgttcgaaaag
gaaggcagcgaacaggaacgcagcgcctgggttcgcgccaaggtggaatgcgaagtcgcc
gagatcagctatgcgaagttccgcgaactgtcgcagcaggactcggagatcctctacacc
ctcggcagccagatggccgaccgcctgcgcaagaccacccgcaaggtgggcgacctggcc
ttcctcgacgtcaccggacgcgtggcccgcaccttgctggacctgtgccagcaaccggac
gccatgacccacccggacggcatgcagatcaagatcacccgccaggagatcggccggatc
gtcggctgctcgcgggaaatggtcggacgcgtgctgaagagcctggaggagcagggcctg
gtgcatgtgaaagggaagaccatggtggtcttcggcacccgctga
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