Pseudomonas aeruginosa NCGM2.S1: NCGM2_6272
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Entry
NCGM2_6272 CDS
T01974
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pnc
Pseudomonas aeruginosa NCGM2.S1
Pathway
pnc03030
DNA replication
pnc03410
Base excision repair
pnc03420
Nucleotide excision repair
pnc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCGM2_6272 (polA)
03410 Base excision repair
NCGM2_6272 (polA)
03420 Nucleotide excision repair
NCGM2_6272 (polA)
03440 Homologous recombination
NCGM2_6272 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnc03032
]
NCGM2_6272 (polA)
03400 DNA repair and recombination proteins [BR:
pnc03400
]
NCGM2_6272 (polA)
Enzymes [BR:
pnc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCGM2_6272 (polA)
DNA replication proteins [BR:
pnc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCGM2_6272 (polA)
DNA repair and recombination proteins [BR:
pnc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCGM2_6272 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCGM2_6272 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
BAK93076
LinkDB
All DBs
Position
1:complement(6675204..6677945)
Genome browser
AA seq
913 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRKQYPDSPFAVVFD
AKGPTFRDELFAEYKANRPSMPDDLRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSRLDVDGVKEKFGVGPELIIDFLALM
GDKVDNIPGVPGVGEKTALGLLTGVGGGLEVLYASLDKVPELPIRGAKGLPAKLEENREQ
AFLSYQLATIKTDVELDVEIDKLYPGEPQREALIALYRELEFKNWLDDLLREAKEAGENG
EAETPIQAEVDYDVVLDQAGFDAWLKKLEEAELIAFDTETTSIDAQQAQVVGVSFAVKEG
EAAYVPLAHSYMGVPEQLDRDAVLRALKPLLEDPKKLKVGQHAKYDINVLANASTPIALR
GVAYDTMLESYVLDSTATRHDMDSLALKYLGHSTIRFEDIAGKGAKQLTFDQIAIEQAGP
YAAEDADVTLRLHQALWQKLEAIPSLARVLTDIEMPLVPVLARIERNGALVDANLLGIQS
RELGEKMVALERQAYDLAGQEFNLGSPKQLGAILYDKLGLPVLSKTATGQPSTAEAVLAE
LAEQDFELPKVIMQYRSMSKLKSTYTDRLPEQINLRTGRIHTSYHQAVAATGRLSSSDPN
LQNIPIRTAEGRRIRQAFVAPQGYKLLAADYSQIELRIMAHLAKDDGLLDAFRHDLDVHR
ATAAEVFGVPLEDVNGDQRRSAKAINFGLIYGMSAFGLAKQIGVERKEAQAYIDRYFARY
PGVLAYMERTRAQAAEQGFVETLFGRRLYLPEIHSKNGAMRKAAERTAINAPMQGTAADI
MKRAMVAVDNWLQESGLDARVILQVHDELVLEVREDLVEQVCEGIRPLMSGAATLDVPLV
VEAGVGSNWDEAH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcgcccctcgtcctggtggacggttcctcgtacctgtaccgcgccttccat
gccctgccgccgctgaccacctcgaccggcaagcccaccggtgcggtgaagggcgtgctg
aacatgctcctgagcctgcgcaagcagtacccggacagcccgttcgcggtggtcttcgac
gccaagggcccgaccttccgcgacgagctgttcgccgagtacaaggccaaccggccgtcg
atgcccgacgacctgcgggtccaggtcgagccgctgcatgccagcgtccgcgccctcggc
ctgccgctgctgtgcgtggagggggtcgaggccgacgacgtgatcggcaccctggcgcgc
agcagcgccgcggctgaccgcccggtggtgatttccaccggcgacaaggacatggcgcaa
ctggtcgacgggcacattacgctggtcaacaccatgaccggtagccgcctcgacgtggat
ggcgtgaaagagaaattcggcgtcggtcctgagctgatcatcgatttcctcgccctgatg
ggcgacaaggtcgacaacatccccggcgttcccggcgtcggcgagaaaaccgcgctgggc
ctgctgaccggcgtcggtggcggcctggaggtgctctacgccagcctggacaaggtgccc
gagctaccgatccgcggcgccaagggtttgccggcgaagctcgaggaaaatcgcgagcag
gcgttcctgtcctatcagttggcgaccatcaagaccgacgtcgaactggacgtggagatc
gacaagctgtatcccggcgagccgcagcgcgaagcgctgatcgccctgtaccgcgagctg
gagttcaagaactggctggacgacctcctgcgcgaggccaaggaggccggcgagaacggc
gaggcggaaacgcctatccaggccgaggtcgactacgacgtggtgctcgaccaggccggg
ttcgacgcctggctgaagaagctggaggaggccgagctgatcgccttcgataccgagacc
accagcatcgacgcccagcaggcgcaggtggtgggggtgtccttcgccgtgaaggagggc
gaggccgcctacgtgccgctggcccacagctacatgggcgttcccgagcaactggaccgt
gacgcggtgctgcgtgcgttgaaaccgctgctggaggatccgaagaagctcaaggtcggc
cagcatgccaagtacgacatcaatgtcctggccaatgccagcacccccatcgcgctgcgg
ggcgtagcctacgacaccatgctcgagtcctatgtgctggactccaccgccactcgccac
gacatggacagcctggccctgaagtacctcggccacagcaccatccgtttcgaggacatc
gccggcaagggcgccaagcaactgaccttcgaccagatcgccatcgaacaggccgggccc
tatgcggcggaggacgccgacgtgaccctgcgcctgcaccaggccctgtggcagaagctg
gaggcgatcccgtccctggccagggtcctgaccgacatcgagatgccgctggtaccggtg
ctggcgcggatcgagcgcaacggcgcgctggtcgacgccaacctgctgggcatccagagc
cgcgaactgggcgagaagatggtcgccctggagcgccaggcatacgacctggcagggcag
gaattcaacctcggctcgcccaagcagctcggcgcgatcctctacgacaagctcggcctg
ccggttctgagcaagaccgcgaccggccagccgtccaccgccgaggcagtgctcgccgaa
ctggccgagcaggacttcgagctgcccaaggtgatcatgcagtaccgctccatgagcaag
ctcaagagcacctacaccgaccgcctgcccgagcagatcaacctgcgtaccggacgcatc
catacctcataccaccaggcggtggcggctaccgggcggctgtcgtcgagcgacccgaac
ctgcagaacatcccgatccgtaccgcggagggccggcgcatccgccaggcgttcgtcgcg
ccgcagggctacaagctattggccgcggactactcgcagatcgagctgcggatcatggcc
cacctggccaaggacgatggcctgctggatgccttccgccacgacctggacgtacaccgc
gccaccgcggcggaagtcttcggcgtgccgctggaagacgtcaacggcgaccagcgacgc
agcgccaaggcgatcaacttcggattgatctacggcatgagcgccttcggcctggccaag
cagatcggcgtcgagcgcaaggaggcccaggcctacatcgaccgttacttcgcccgctac
cccggcgtcctggcgtacatggaacggacccgcgcccaggccgcggagcagggcttcgtc
gaaaccctgttcggccgtcgcctgtacctgccggagatccattcgaagaacggtgccatg
cgcaaggccgccgagcgcaccgcgatcaacgcgccgatgcagggcaccgcggcggacatc
atgaagcgcgccatggtcgctgtggataactggctgcaggaaagcggcctcgatgcccgg
gtgatcctccaggtgcacgacgaactggtgctggaagtgcgcgaggacctggtcgagcag
gtgtgcgagggaatccgcccgctgatgagcggcgcggcgaccctggacgtaccgctggtg
gtcgaggcgggtgtcggttcgaactgggacgaagcccactga
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