Pirellulimonas nuda: Pla175_05230
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Entry
Pla175_05230 CDS
T06953
Symbol
lysA_1
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pnd
Pirellulimonas nuda
Pathway
pnd00300
Lysine biosynthesis
pnd00470
D-Amino acid metabolism
pnd01100
Metabolic pathways
pnd01110
Biosynthesis of secondary metabolites
pnd01120
Microbial metabolism in diverse environments
pnd01230
Biosynthesis of amino acids
Module
pnd_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pla175_05230 (lysA_1)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pla175_05230 (lysA_1)
Enzymes [BR:
pnd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Pla175_05230 (lysA_1)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QDU87167
UniProt:
A0A518D6Q9
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All DBs
Position
641037..642392
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AA seq
451 aa
AA seq
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MPSPLVQTQIAGHSIPELAAQYSTPLYVYDAQTIVQRIAELKRFDVIRFAQKACSNIAVL
DLMRRHGVLVDAVSSGEVARAVAAGFKLGPGEPAQVVYTADIFDRESLDLVINQGVPVNC
GSPDMLDQYGARSAELGKAPLGVTLRVNPGFGHGHSQKTNTGGEQSKHGIWHTDIADCKQ
RAGRHGLSITGLHMHIGSGTDLEHLGQVCGALEKTALEIGPSIHSISAGGGISTPYREGD
VRADLSGYFELWDAARRRLAEAFGHAVSLEIEPGRYLAAESGWLISEVRAVKQQGNNLFY
LVDAGFNNLARPILYGAYHPMTICPGEGGEASGEGRASTGEPSAPRLSNHTDGATHGHPT
QKVVVGGPLCESGDIFTQDEGGFVNQRELPEARVGDFLVIGCAGAYGAVMGSNYNSKPLA
AEVLIEEGKAHLVRERQTSDDLLRGEKLVSY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcccgctcgttcaaacccaaatcgccggccactccatcccggagctggcggcc
cagtacagcacgccgctgtacgtctacgacgcccagacgatcgtccagcggatcgcggag
ctgaagcggttcgacgtgatccgcttcgcccagaaggcctgctcgaacatcgcggttctc
gacctgatgcgccgccacggcgtgctggtcgacgcggtcagctccggtgaagtcgcccgc
gcagtcgcggccggctttaagctgggtccgggcgagccggcccaagtggtgtatacggcc
gatattttcgaccgcgagtcgctcgacttggtgatcaaccaaggggtgccggtcaactgc
ggctcgcccgacatgctcgaccagtacggcgcccgttcggccgaactgggcaaggcgccg
ctgggggtgacgctccgcgtgaaccccggcttcggccacggccacagccaaaagaccaac
accggcggcgagcagagcaagcacggcatctggcacaccgacatcgcggattgcaagcag
cgcgccggccggcacggcctgtcgatcaccggcctgcacatgcacatcggctccgggacc
gacctagagcacctgggccaggtgtgcggggctttagaaaaaacggcgctggagatcggc
ccgtcgatccactccatcagcgccggcgggggcatcagcacgccctaccgcgagggggac
gtccgcgccgacctgtcgggctacttcgagctgtgggacgccgcacgccgccggctcgcc
gaggctttcggccacgcagtgagcctggagatcgagccgggccgctacctcgccgcggag
tcgggctggctgatctccgaggtccgggccgtgaagcagcagggaaacaacctcttttac
ttggtcgacgccggcttcaacaacctggcccgccccatcctgtacggcgcgtaccacccg
atgaccatctgtccgggagaggggggcgaggcgagcggcgaggggcgagcatccacgggc
gagccgtcggcgccccgtctcagcaaccacaccgacggagcaacccacggccaccccacc
caaaaagtagtcgtcggcggccccctgtgcgaatcgggcgacatcttcacgcaggacgaa
gggggcttcgtcaaccagcgcgaactgcccgaggcccgcgtcggcgacttcttggtgatc
ggctgcgccggcgcctacggcgcggtgatggggagcaactacaactccaagccgctggcc
gccgaggtgctgatcgaggagggcaaggcccacctggtccgcgagcggcagacaagcgac
gacctgctgcgtggcgaaaagctggtttcatattag
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