Pirellulimonas nuda: Pla175_06990
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Entry
Pla175_06990 CDS
T06953
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pnd
Pirellulimonas nuda
Pathway
pnd00300
Lysine biosynthesis
pnd00470
D-Amino acid metabolism
pnd01100
Metabolic pathways
pnd01110
Biosynthesis of secondary metabolites
pnd01120
Microbial metabolism in diverse environments
pnd01230
Biosynthesis of amino acids
Module
pnd_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pla175_06990 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pla175_06990 (dapF)
Enzymes [BR:
pnd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Pla175_06990 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
QDU87340
UniProt:
A0A518D777
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All DBs
Position
828590..829426
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AA seq
278 aa
AA seq
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MKFTKMHGAGNDYVYVDCFAQDPPPDPEGLARRLADRHTGVGGDGLILILPSERADAEMR
MYNADGSYSEMCGNGIRCVAKYVYDHNLCRKPRLVIESAGKLLSLDLTIEDERVERVRVD
MGEPILDAAHIPTLLPGPMVVNTPLDAGGQLFAVTAVSMGNPHCVVFVECATDELVLGVG
PKIEHDPAFPNRVNVEWVEVLAPDRVRQRTWERGSGETLACGTGASAVCVAGVLTGRTDR
RVMVELLGGLLELEWNEADNHVYMTGPAVEVFSGEWPA
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaccaagatgcacggcgccggcaacgactatgtgtatgtcgattgctttgcc
caagacccgccacccgacccggaggggcttgcgcggcgcctcgccgaccggcacaccggc
gtcggcggcgacgggctcatcctgatcttgcccagtgagcgggccgacgccgagatgcgc
atgtacaacgcagacggctcgtacagcgagatgtgcggcaacggcatccgctgcgtcgcc
aagtacgtgtacgaccacaacctgtgccgcaagccgaggctggtgatcgagtcggccggc
aagctgctgtcgctcgacctgacgatcgaagacgagcgtgtcgaacgcgtccgggtcgac
atgggcgagccgatcctcgacgccgcgcacatccccacgctgctgccggggccgatggtg
gtcaacacgccgttggacgccggtgggcaactgttcgcggtgacggccgtctcgatgggg
aacccgcactgcgtggtgtttgtcgagtgtgcgaccgacgaactagtgctgggggtcggg
ccgaagatcgagcacgacccagccttcccaaaccgcgtgaacgttgagtgggtggaggtg
ctggcgcccgaccgagtgcgccaacgcacctgggaacgcggctccggcgaaaccctggcc
tgcggcaccggcgccagcgccgtgtgcgtggccggcgtgttgaccggccgcacggatcgc
cgcgtgatggtggaacttctcggcggactgctggagctagagtggaacgaggccgacaat
catgtctatatgaccggcccggcggtcgaagtattcagcggcgagtggccggcgtga
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