Pirellulimonas nuda: Pla175_08700
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Entry
Pla175_08700 CDS
T06953
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
pnd
Pirellulimonas nuda
Pathway
pnd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pla175_08700 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnd03400
]
Pla175_08700 (uvrB)
DNA repair and recombination proteins [BR:
pnd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pla175_08700 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Pla175_08700 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_16
AAA_22
SWI2_SNF2
T2SSE
AAA_33
Kinesin
AAA
Microtub_bd
AAA_7
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QDU87508
UniProt:
A0A518D7P5
LinkDB
All DBs
Position
complement(1016273..1018348)
Genome browser
AA seq
691 aa
AA seq
DB search
MPQFQLHSEFQPAGDQPAAIEQLVAGLKSGRDQQVLMGVTGSGKTFTMANVIQQLQRPTL
VLSHNKTLAAQLYGEFRDFFPNNAVSYFVSYYDYYQPEAYIPQRDIYIEKDSSINEEIDR
LRLATTSNLVSRRDVIVVASVSCIYGLGSPEDYKAMMVGLTVGDVVDRDEVLARLIDVQY
ERNDLDPQRGKFRVRGDSVEVWPAYEEFAYRMEFWGDEVEKLSIINPTSGQVIDTLQQIY
IYPAKHFVLPEERVEAAVQRIRFELADRLELFKSQGKLLEAQRLNARTRYDIEMLLEMGY
CPGIENYSGPLSGRPSGETPSTLFNYFPDDYLLFIDESHATVPQIGAMYNGDRSRKGTLV
EHGFRLPSALDNRPLKFEEWRAKAKQVVYVSATPADFELEQSGGEVVEQIVRPTGLLDPV
IEVVPARGQVPHLLEEIRKRAAVGERTLVTTLTKRLAEDLSHYLSEQGVKCKWLHSELDA
FERVELLRDLRQGLFETLVGVNLLREGLDLPEVSLVAILDADKEGFLRSETSLMQTIGRA
ARNVNARVILYADKVTGSMQRAMDETDRRRTLQQEYNKEHNITPETIKKAIRMGIEQEAS
AHARANAAVGRNDETRYVTEEYISELEKEMYEAADQMEFERAATIRDRIGKMRESIGQSV
DAVESQIKKGGSKRGRKGKGGARVPKPNKGV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaattccagctccacagcgaattccagcccgcgggcgaccagccagcggccatc
gagcagctcgtcgcaggcctcaagagcggccgagaccagcaggtgctgatgggggtcacc
ggcagcggcaagacgttcaccatggcgaacgtcatccagcagctccaacgcccgacgttg
gtgctgagccacaacaagacgctcgcagcccagctctacggcgagttccgcgacttcttc
cccaacaacgcggtctcgtacttcgttagctactacgactactaccagcccgaggcgtac
atcccccagcgggacatctacatcgagaaagactcttcgatcaacgaagaaatcgaccgc
ctccgcctggccaccaccagcaacctggtgagccggcgggacgtgatcgtggtggcgagc
gtttcttgcatctacggcctggggtcgcccgaggactacaaggcgatgatggtcggcctg
acagtcggggacgtggtcgaccgcgacgaggtgctcgcccggctgatcgatgtgcagtac
gagcggaacgacctcgacccgcaacggggcaagttccgtgtgcggggagacagcgttgag
gtgtggcccgcctacgaggagttcgcctatcggatggagttttggggggacgaggttgaa
aagctcagcattatcaacccgacatctgggcaggtcatcgacactctccagcagatctac
atctacccagccaagcactttgtgttgcccgaggaacgggtcgaggcggcggttcagcgg
atccgctttgagttggcggatcggctcgaactgttcaagtcacaaggcaaactgctcgaa
gcccaacgcctgaacgcccgcacaagatacgacatcgagatgctgctagagatgggctac
tgccccggcatcgagaactacagcgggcccctttccggccggccttctggcgagacgccg
tctacgctcttcaactatttcccggacgactacctgctgttcatcgacgagtcgcacgcc
accgtcccgcagatcggcgccatgtacaacggcgaccggagccggaaagggacgctggtg
gagcacggcttccgcctaccgagcgcgctggacaaccgcccgctgaagttcgaagagtgg
cgggccaaggccaagcaggtggtctacgtctcggcgactccggccgacttcgagctggag
cagtccggcggcgaggtggtagagcagatcgttcgtcccacggggctgctggaccccgtg
atcgaggtcgtccccgcacgcggccaggtcccccacttgctcgaagagatccgtaagcgc
gccgcggtgggcgaacgaaccttggttacgaccctcaccaagcggctcgccgaagacttg
tctcattacctgtcagaacaaggggtcaagtgcaagtggctgcactcagagctggacgcg
ttcgaacgggtcgagctgctgcgtgacctgaggcaaggactgtttgaaacattagtggga
gtcaacctgctccgcgaggggctcgacctccccgaagtgtcgctggtggcaatcctcgac
gcagacaaggaaggcttcctaaggagcgaaacctcgttgatgcaaacgatcggtcgggcg
gcccggaacgtgaacgcgagggtcatcctctacgcagacaaggtaaccggcagcatgcag
cgggcgatggatgaaacagatcgacgccggacgctgcagcaagagtacaacaaagagcac
aatatcacgcccgaaacgatcaagaaggcgatccgcatggggatcgaacaggaggcgtct
gcccacgcccgcgcaaacgccgcggttggtcgcaacgacgagacccgctacgtcaccgag
gagtacatctccgagctggaaaaagagatgtacgaagcagccgaccagatggagttcgag
cgggccgcgaccatccgcgaccgtatcggcaagatgcgcgaaagcatcggccagagcgtc
gacgcggtcgagagccaaatcaagaagggggggtcgaagcgtgggcggaagggaaagggt
ggcgcacgggttccgaaaccgaacaaaggggtttag
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