KEGG   Pirellulimonas nuda: Pla175_08850
Entry
Pla175_08850      CDS       T06953                                 
Symbol
lpd3
Name
(GenBank) Dihydrolipoyl dehydrogenase 3
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pnd  Pirellulimonas nuda
Pathway
pnd00010  Glycolysis / Gluconeogenesis
pnd00020  Citrate cycle (TCA cycle)
pnd00260  Glycine, serine and threonine metabolism
pnd00280  Valine, leucine and isoleucine degradation
pnd00310  Lysine degradation
pnd00380  Tryptophan metabolism
pnd00620  Pyruvate metabolism
pnd00630  Glyoxylate and dicarboxylate metabolism
pnd00640  Propanoate metabolism
pnd00670  One carbon pool by folate
pnd00785  Lipoic acid metabolism
pnd01100  Metabolic pathways
pnd01110  Biosynthesis of secondary metabolites
pnd01120  Microbial metabolism in diverse environments
pnd01200  Carbon metabolism
pnd01210  2-Oxocarboxylic acid metabolism
pnd01240  Biosynthesis of cofactors
Module
pnd_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pnd_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pnd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pnd_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pnd00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    Pla175_08850 (lpd3)
   00020 Citrate cycle (TCA cycle)
    Pla175_08850 (lpd3)
   00620 Pyruvate metabolism
    Pla175_08850 (lpd3)
   00630 Glyoxylate and dicarboxylate metabolism
    Pla175_08850 (lpd3)
   00640 Propanoate metabolism
    Pla175_08850 (lpd3)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Pla175_08850 (lpd3)
   00280 Valine, leucine and isoleucine degradation
    Pla175_08850 (lpd3)
   00310 Lysine degradation
    Pla175_08850 (lpd3)
   00380 Tryptophan metabolism
    Pla175_08850 (lpd3)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    Pla175_08850 (lpd3)
   00670 One carbon pool by folate
    Pla175_08850 (lpd3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pnd04147]
    Pla175_08850 (lpd3)
Enzymes [BR:pnd01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     Pla175_08850 (lpd3)
Exosome [BR:pnd04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   Pla175_08850 (lpd3)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_binding_2 NAD_binding_8 HI0933_like Pyr_redox_3 FAD_oxidored GIDA DAO FAD_binding_3 AlaDh_PNT_C UDPG_MGDP_dh_N Thi4 Lys_Orn_oxgnase Amino_oxidase Lycopene_cycl 3HCDH_N
Other DBs
NCBI-ProteinID: QDU87523
UniProt: A0A518D7R5
LinkDB
Position
complement(1029561..1030949)
AA seq 462 aa
MQQHDLIVIGAGPGGYVAAIRATQLGMDVACIEKEPKLGGTCLRVGCIPSKALLESSEIY
AEAAGGFSKHGIKVGKLSLDLEAMLKRKDGVVDALTKGIDGLLKKNKITRYLGTGSFAGP
GRVDVEDADGKRTKLQATHILIATGSVPSKLRGVETDGDRIGTSTEALSYPEVPKHLVVI
GAGYIGLELGAVWSRLGAKVTVLEYLDRILPGTDAEVAAEAQKLFKKQGLSFQLGTKVTG
VSVKKNTCTVEIEGAEPIECDRVLVAAGRMATTAGLNLEAIGLATDDRGRIEVDDHFRTS
VENVYAIGDVIRGPMLAHKAEEEGVACAEIIATGHGHVDYNAIPSVAYTHPEIAAVGQTE
EQLKEAGIAYKKGVFHFRGNGRARALNQTDGFVKVLSDAETDRLLGVHIIGPRAGDLIAE
AATAMTFHASAEDLARACHAHPTLSEVLKEAALAVDGRALHA
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgcagcaacacgatcttatcgtcatcggcgccgggcccggcgggtatgtcgcggctatc
cgcgcgacgcagcttgggatggatgtcgcctgcatcgagaaggaacctaagctcggcggc
acctgcctgcgggtggggtgcatccccagcaaggcgctcttggaatcgagcgagatctac
gccgaggcggccggcggctttagcaagcacggcatcaaggtgggtaagctgtcgctcgac
ctcgaagcgatgcttaagcgcaaggacggcgtggtcgatgcgctgaccaaagggatcgat
ggccttctcaagaagaacaagatcacccgctatcttggcacgggcagctttgccggcccc
ggccgggtggatgtcgaagacgccgatggcaagcggaccaagctccaggccacacacatc
ctgatcgccaccggcagcgtcccctcaaagctgcgcggcgtagagacagacggcgaccgc
atcggcaccagcaccgaggcgctctcctaccccgaggtccccaagcacctggtagtgatc
ggcgcggggtacatcggcctcgaactgggcgccgtctggagccggctcggcgccaaggtg
accgtgctggagtacctcgaccgcatcctccccggcaccgacgccgaggtggccgccgag
gcgcagaagctgttcaagaagcaggggctctcgttccagctcgggaccaaggtgaccggc
gtctcggtgaaaaagaacacgtgcaccgtcgagatcgagggcgcggagcccatcgagtgc
gaccgcgtgctggtcgccgccggccggatggccaccaccgcggggctcaacctcgaagcc
atcggcctggcgaccgacgaccgcggccgcatcgaggtcgacgaccacttccgcaccagc
gtcgagaacgtctacgccatcggcgacgtcatccgtggcccgatgctggcccacaaggcg
gaggaagaaggggtcgcctgcgccgaaatcatcgccaccggccacggccacgtcgactac
aacgccatccccagcgtcgcctacacccaccccgagatcgccgcggtcggacagaccgaa
gagcagctcaaggaagcgggcatcgcgtacaaaaaaggcgtcttccacttccgcggcaac
ggccgcgcccgcgcgctgaaccagaccgacggcttcgtcaaagtgctgtccgacgccgag
acggatcgcttgctgggcgtgcacatcatcggcccccgcgcgggcgacctgatcgccgaa
gccgccacggcgatgacgttccacgccagcgcggaagacctggcccgtgcgtgtcatgcg
caccccacgctttccgaggtgctcaaggaagctgcattggcggtggatggccgggcgctg
cacgcgtag

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