Pirellulimonas nuda: Pla175_14470
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Entry
Pla175_14470 CDS
T06953
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pnd
Pirellulimonas nuda
Pathway
pnd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pla175_14470 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnd03019
]
Pla175_14470 (pnp)
03016 Transfer RNA biogenesis [BR:
pnd03016
]
Pla175_14470 (pnp)
Enzymes [BR:
pnd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Pla175_14470 (pnp)
Messenger RNA biogenesis [BR:
pnd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Pla175_14470 (pnp)
Transfer RNA biogenesis [BR:
pnd03016
]
Prokaryotic type
tRNA degradation factors
Pla175_14470 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
aRib
Motif
Other DBs
NCBI-ProteinID:
QDU88077
UniProt:
A0A518D9B6
LinkDB
All DBs
Position
complement(1728414..1730537)
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AA seq
707 aa
AA seq
DB search
MLNRIRVEREIGHGTLSIETGALAKQAAGAVMVQYGDTVVLVASASGPSRPGIDFFPLTC
DYRERHAAAGKFPGGFLKREGRPTTKETLTSRLMDRPIRPLFPEGYNDEVQIQASVLSSD
RQNDGDVLAMNGASAALTISPLPFQGPIASVRMGLVDGKFVPFPTAEELESSELDLILSG
SKDAVLMIEGFSREMPEDRMAEAIMEAHRVVGVLCEMQEELASKVSVQKMDYKAPTPDGL
KDKLAGAFHDKLKNAVRTHGKADRAEAVRGVKEEAMASLIPDPTAEGAFTKESFGKEFHD
LKAAVVRECILDGERPDGRDSKTLRPIVCEVDLLPRVHGSALFQRGETQALITIALGTGR
DEQRVDGLLEEYSKHFMLDYNFPSFSVGEVRPIRGPGRREIGHGMLAERSVGPVLPDHDA
FPYTIRVISDILESNGSSSMASVCGATLGLMAAGVPITNPVAGISVGLVKEGDRYVLLTD
ILGDEDHYGDMDFKIAGTQNGITGIQLDLKINGISEEIIRATLAQSREARIEILKAMLQG
IARPRSSTAPTAPRLVRTSIDPQKIGLLIGPGGKNIRGIQEDCGVTIDVEEDGTVTIAGP
DEETVKAGLARVEALTASVQVGRIYHGRVTSVKDFGAFVEILPGKDGLCHISELSNEYVG
SVGDICKVGDSMSVKVIAVDEQDRVKLSRRAAMADEAGEAETVESEA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatcgaatccgagttgagcgagagatcggccacggcaccctgtccatcgagacc
ggcgctctagccaaacaagccgcgggcgccgtcatggtgcagtatggcgacaccgttgtg
ctggtggcgtcggcaagcggcccttcccgacccgggatcgacttcttcccgctgacctgc
gactaccgcgagcggcacgccgcggcgggcaagttccccggcggcttcctcaagcgcgaa
ggccggccgaccaccaaagagacgctcaccagccggctgatggaccgccccatccggccg
ctgttccccgaaggctacaacgacgaggtgcagatccaggcctcggtgctttcgagcgac
cggcagaacgacggcgatgtgctggcaatgaacggcgcctcggccgcgctcaccatcagc
cccctccccttccagggtccgatcgcctcggtccggatgggtttggtcgatggaaagttc
gtccccttccccaccgccgaggagctggagtcgagtgaactcgacctgatcctctccggc
tcgaaggacgccgtgctgatgatcgagggcttcagccgcgagatgcccgaagaccgcatg
gccgaagcgatcatggaggcccaccgtgtggttggggtcctttgtgagatgcaggaagag
ctggcgtcgaaggtctcggtccaaaagatggactacaaggcaccgacccccgatggcttg
aaagacaagctggccggggcgttccacgacaagctcaagaacgccgtccgcacccacggc
aaggccgaccgggccgaggccgtacgcggagtgaaggaagaagcgatggcgtcgctgatc
ccggaccccacggccgagggcgccttcaccaaggaatcgttcggcaaggagttccacgac
ctcaaggcggccgtggtgcgtgagtgcatcctggacggcgagcgtcccgacggtcgcgac
tccaagaccctccgcccgatcgtgtgcgaggtcgacctgctcccccgcgtgcacggatcg
gccctgttccagcgtggcgagactcaggcgctgatcaccatcgccctgggaaccggccgc
gacgagcagcgcgtcgatggcctgctggaggagtacagcaagcacttcatgctggactac
aacttcccgtcgttcagcgtcggcgaggtgcgtccgatccgcggcccgggccggcgagag
atcggccacggcatgctggccgagcgtagcgtcggccccgtgctgccggaccacgacgcg
ttcccctacaccatccgcgtgatcagcgacatcctggagtcgaacggctcgagcagcatg
gcgagcgtctgcggcgccacgctgggcctgatggccgccggcgtgccgatcaccaacccg
gtggcgggcatctcggtcggtttggtcaaggagggagaccggtacgtgctgttgaccgac
atcctcggcgacgaggaccactacggcgacatggacttcaagatcgccggcacgcagaac
ggaatcaccggcatccagctcgacctgaagatcaacggcattagcgaggagatcatccgc
gccacgctggcccagagccgcgaggcccggatcgagatcctcaaggcgatgctgcaaggg
atcgcccggccgcgcagcagcacggcgcccacggcgccgcgactggtccgcacgtcgatc
gacccgcagaagattggcctgctgatcggccccggcggcaagaacatccgcggcatccaa
gaggattgcggcgtgacgatcgacgtcgaggaagacggcaccgtgaccatcgccggcccg
gacgaggagaccgtcaaggcgggcctggcgcgtgtcgaggcgctgaccgccagcgtgcag
gtgggacgcatctaccacggccgtgtgaccagcgtgaaggacttcggcgcgtttgttgag
atcctccccggcaaggacgggctgtgccacatcagcgagctctccaacgaatacgtcggc
agcgtcggcgatatctgcaaggtaggagactcgatgagcgtcaaggtgatcgccgtcgac
gagcaggaccgcgtgaagctgagccgccgcgccgccatggcggacgaggcgggcgaggcc
gagacggttgagtccgaggcctag
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