Pirellulimonas nuda: Pla175_20200
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Entry
Pla175_20200 CDS
T06953
Symbol
polA_1
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pnd
Pirellulimonas nuda
Pathway
pnd03030
DNA replication
pnd03410
Base excision repair
pnd03420
Nucleotide excision repair
pnd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pla175_20200 (polA_1)
03410 Base excision repair
Pla175_20200 (polA_1)
03420 Nucleotide excision repair
Pla175_20200 (polA_1)
03440 Homologous recombination
Pla175_20200 (polA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnd03032
]
Pla175_20200 (polA_1)
03400 DNA repair and recombination proteins [BR:
pnd03400
]
Pla175_20200 (polA_1)
Enzymes [BR:
pnd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pla175_20200 (polA_1)
DNA replication proteins [BR:
pnd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Pla175_20200 (polA_1)
DNA repair and recombination proteins [BR:
pnd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Pla175_20200 (polA_1)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pla175_20200 (polA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
RNA_pol_Rpb6
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QDU88640
UniProt:
A0A518DAX9
LinkDB
All DBs
Position
complement(2465580..2468351)
Genome browser
AA seq
923 aa
AA seq
DB search
MTPSDQPSPVAPGTGAPPSGWSVYVVDCHSLIFQVFHAIPEMTSPQGEPVSAVFGFTRDL
LFLIEEKRPDALICVFDPPGGTFRDEIYDAYKAGRSSMPEDLSSQIPKIQQVIAALGAPV
VTVPRFEADDVLATIARWCDEAGAECRLVTGDKDCRQLITDRVSVLNIRKNQEYDAAALA
ADWGIRPDQVCDFQALVGDKVDNIPGVPSIGPKSAKELLDRFGNLAAVLDGAEQIKGAKR
AKLLQHRADAELSRRLVELDRFVPLDPDWPAWKLGAPDAESLSELMREYGFRGLGDRAKQ
LAQGATGEPVADDWQAEYRTVTSLEELAELVARARRAGRVCVDTETTAKSPRHAELVGVA
LAWEPGEAYYVPVRGPAGDAVLPLAGVVETLRPLLEDPTIGKIGQNLKYDLVVLRGVGLR
VSGVEFDTMIASYLLGAGERNHGLDELSLRRLGHETIKITSLIGKGKDQKRMDEVPVAEV
GPYAAEDADVPLRLLPILAQELAQNDLVQLNDEVETPLVPVLADLEYEGVRVDADQLAAL
SERFALRLDELQGEIETLAGGPFNIASPKQLADVLFNQLGLPVQKRTKTGPSTDADVLEA
LARLHPLPELIVQHRQFSKLKGTYVDALPELIHPGTGRVHCSLNQVVAATGRLSASDPNL
QNIPVRTEAGREIRAAFTAREPGWRLLAADYSQIELRVLAHYSEDRGLCEAFASDRDIHT
LVASQVGGVSIDEVTDAMRRGAKAVNFGIIYGQSPFGLARSLGIPKDEAARFISDYFERY
PGVLDFIETTLAACRRDGMVRTLLGRKRAISGVRPRPRSAELFDRRATPPQLTLPERTAV
NTVIQGTAADLIKLAMLAVHRQIEENGLRSRMILQIHDELLFDAPEEEIDPLAALVREQM
QGVAQLRVPLKVDIKTGKNWAEC
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgacccccagcgaccaaccgtccccggtcgcccccggcacgggcgcgcccccgtcgggc
tggagcgtctacgtggtggactgccattcccttattttccaggttttccacgcgatcccg
gagatgaccagcccccagggggagccggtttctgccgtatttggctttacgcgggacctg
ctgtttttgatcgaagagaaacgcccagacgccttgatctgcgtcttcgaccccccgggg
gggaccttccgagacgagatctacgacgcctacaaggcggggcggagctcgatgccggag
gacctcagcagccaaatccccaagatacagcaggtgatcgccgcccttggggcgccggtg
gtcactgtccccaggttcgaggcagacgacgtgctggcgacgatcgcccgttggtgcgac
gaggcgggcgcggagtgccggttggtgaccggcgacaaagactgccggcagctaatcacc
gaccgggtctccgtgctgaatatccgcaagaaccaggagtacgacgcggccgcattggct
gccgactggggcatccggcccgatcaggtctgcgatttccaggcgctggtcggcgacaag
gtcgacaacatcccgggggtcccatccatcggccccaagagcgccaaggaactgcttgat
cggttcggcaatctggccgcggtgctcgacggcgccgagcagattaagggggccaaacgc
gccaagctactccagcatcgcgcagatgcagagctttcccgccggctcgtggagctagac
cgcttcgttccgctcgaccccgactggccggcgtggaagttgggcgcccccgacgcagaa
tcgctctcagagctgatgcgggagtatgggttccgtggactcggagaccgcgccaagcag
ctcgcccaaggcgccacgggcgagcctgtggccgacgactggcaggccgagtaccggacg
gttacttccctcgaagaactcgccgagctggtcgctcgggcccgccgggcaggccgggtg
tgcgtcgacaccgagaccaccgccaagtcgccgcggcacgcagagctggtgggcgtcgcc
ttggcgtgggagccgggcgaggcgtactacgtgccggttcgcggcccggccggcgacgcg
gtgctgccgctggccggagtggtagagacgctgcggccgctgctggaagaccccacgatc
ggcaagatcggacagaacctgaagtacgacctcgtcgtgcttcgcggcgttggtctgcgt
gtgtcgggggtcgagttcgacaccatgatcgccagctacctgctgggggccggcgaacgg
aaccacgggctcgacgagttgtcgctccgccgcctgggccacgagacgatcaagatcaca
agcctgatcggcaaggggaaagaccagaagcggatggacgaggtgccggtcgcggaggtc
gggccctacgcggcggaagacgccgacgtgccgctcaggctgctgccgatcctggcccag
gagctggcgcaaaacgacctcgtccagctcaacgacgaggtagaaacgcccctggtgccg
gtgctggccgacctggagtacgaaggagtgcgtgtcgatgcggaccaactcgccgcgctg
agcgagcgtttcgccctgcggctcgacgagttgcagggagagatcgagacgctcgcggga
gggcccttcaacatcgcgtctcccaagcagctcgccgacgtgctgtttaaccagttgggg
ctgccggtgcagaaacgaaccaaaaccggccccagtacagacgccgacgtgctggaggcg
ctcgcccgactccacccattgcccgagctaatcgtccagcaccggcagttttccaagctc
aaggggacgtacgtcgacgccctgcccgagctgatccaccccggaaccggccgcgttcat
tgctcgctgaatcaagtggtggccgccaccggccggctgagcgccagcgacccgaacctg
cagaacatcccggtccgcaccgaagcgggccgcgaaatccgcgccgccttcaccgcacga
gagcccggctggcggctgctggcggccgactattcgcagatcgagctccgcgtgctggcc
cactactccgaggaccgcggtctgtgcgaggcgttcgccagcgaccgggacatccacaca
ttggtcgcgagccaggtcgggggagtatcgatcgacgaggtcaccgacgcgatgcgacgc
ggcgctaaggccgtgaacttcggcatcatctatggccagagcccgttcgggctggcgcgg
tcgctggggatccccaaagacgaagcggcgcggttcatttccgactactttgaacgctac
ccgggcgtgctcgacttcatcgagacgacactcgccgcgtgccgcagagacggcatggtg
cggaccctactggggcgcaaacgtgcgatctccggagtacgcccccgcccgcggtcggcc
gagttgttcgaccggcgtgccacccccccgcagctaacgcttccggagcgcacggccgtg
aacacggtgattcaagggaccgcggccgacctcatcaagctggcgatgctggccgtgcac
cggcagattgaggagaacgggctgaggtcgcggatgatcctgcagatccacgatgagctg
cttttcgacgcgccggaagaagaaatcgatcccttggccgcgttggtccgcgagcagatg
cagggtgtagctcaactgcgagtcccgttgaaggtggacatcaagaccggcaagaactgg
gccgagtgttag
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