Pirellulimonas nuda: Pla175_20550
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Entry
Pla175_20550 CDS
T06953
Name
(GenBank) Bacterial alpha-L-rhamnosidase
KO
K05989
alpha-L-rhamnosidase [EC:
3.2.1.40
]
Organism
pnd
Pirellulimonas nuda
Pathway
pnd00946
Degradation of flavonoids
pnd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00946 Degradation of flavonoids
Pla175_20550
Enzymes [BR:
pnd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.40 alpha-L-rhamnosidase
Pla175_20550
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_rhamnosid6H
Bac_rhamnosid_N
Bac_rhamnosid
Bac_rhamnosid_C
Motif
Other DBs
NCBI-ProteinID:
QDU88675
UniProt:
A0A518DB21
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Position
2506882..2510103
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AA seq
1073 aa
AA seq
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MVSPVFARAALGCFSTCLIAAASTTYAAGGLNAERLRCEHRTAPLGVDVARPSLSWIVTS
EARDQRQTAYQVQVASTPKKLSAGQPDLWDSGRVESDETLAVRYAGKPLKTNQRCFWRVR
VWDRDGQASEFSDATQWTTGLLSPSDWQGDWIGFDAGRTDSRPDAPLDGASWIWAPPGGD
GKPRNGSHGFAARFDLPADARVESAEAVMYGDDSVRMFINGDEANCGIRGGKPFTVDVSH
LLRPGMNQIRLLCANKSPKSAGVIAKLTVTTDHGGRVLLTNKDWAWVDAPKADWETGDDE
PNFDQTAAAVAEYGKGPWGKVGPAVPLLPPPACLRADFGVDRPVKRAIVYAAVLGDCELR
LNGERVSEDYFPSGWTDYTKRVYYRAYDVTKLIRQGQNAAAVVLADGWYSGHIGWGVNTP
ARDHYAEHPRFAGQLVLQFEDGGEEVLATGADWVASTGGTREADFLQGETFVAEAEPQGW
DAPGFDDSGWSPVEVGADVDPVVQWHPAQPVRELETFEPVEVTEPTPGAYVLNLGQNFAG
VPRIRVKGAKPGQVIKLRFAERLNPDGTVYLTNMRTARATDTYVCRGDTEETWQPRHTFH
GFQYIEVRGLGHAPSSDEIVGVALSSDTPAVGSFECSDAMLNQLVSNVYWTQRMNFIDIP
TDCPQRDERLGWTGDAQVYIGTACLNCDVQAFFGKWMQDMLDSQRADGQFPMISPTKVAG
DDGGPAWADAGVICPMQLYETYGDRELLARQYPSMKRFVEFCRGRSKDGVLPPDQFHCFG
DWLSVNADTPKDVIYTAYYAQSTRLTAEAAEILGFSTDAKELRALHKRIKQAFQKKFVKD
GGRIEGDTQCCYALALAYGLVDGKDRQAASRYLVEDIKKRGGRLSTGFIGTKDLMLVLSK
IGRQDVAYDLLFSDKFPGWGFSIKQGATSIWERWDGWTPEQGFQSAGMNSFAHYSFGAVY
RWMVENIGGIRPTSPGYATLTIAPEVTDRLEWAKTSYDSVRGPIASDWRREEGRFLLNVS
VPANTTAQLRLPKGASADGLTESGKPWGTSRDEDGVTVLEIGSGDYRFEAPMK
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtcccgttttcgcgcgcgccgcgctgggctgcttctcgacttgcttgatcgcc
gctgcctctaccacctacgctgccggcgggttgaacgccgaacggctccgatgcgagcat
cgcacggcgcccctaggcgtagacgtggctaggccttcgctaagctggatcgtcacctca
gaggcgcgcgaccagcgacaaacagcctaccaggtgcaggtcgcgtcgacgccaaagaag
ctctccgcgggccaacccgacctgtgggattctggccgagtcgaatcggatgaaaccttg
gcggtccgatacgcgggcaagccacttaagacgaaccagcgctgcttttggcgcgtgcgg
gtctgggaccgagatgggcaggcgtctgagttctcggacgcgacgcagtggacgaccggt
ctgctctctcccagcgattggcagggcgattggatcggcttcgacgccggccgcaccgac
agccgcccggacgcgcctctcgatggggcgagctggatctgggcgccccccggcggtgac
gggaagccccgcaacggcagccacggattcgccgccaggttcgacctgccggccgacgct
cgtgttgagtccgccgaggcggtgatgtacggcgacgactcggttcggatgttcatcaac
ggcgacgaggccaactgcggtatccgggggggcaagcctttcaccgtggacgtgtctcac
ctgctgaggccggggatgaaccagatccgtctgctgtgtgcgaacaagtcgcccaaatcg
gccggggttattgcgaaactgacggtgacgaccgaccacgggggccgcgtgctgctaacc
aacaaggattgggcctgggtcgatgctcccaaggcggactgggagaccggcgacgacgag
ccaaacttcgaccagaccgccgccgcggtggcagagtacggaaagggcccctggggaaaa
gtggggccggccgttccgttgctgccccctccggcctgtctgcgtgccgacttcggcgtc
gatcggccggtcaagcgggcgattgtctatgccgccgtgctcggtgactgcgaactgcgt
ctgaacggagaacgtgtgtcggaagattatttcccatctgggtggaccgactacaccaaa
cgcgtctactaccgcgcctacgacgtcacgaaactcatccgccaagggcagaacgccgcg
gcggtagtcttggcggatggttggtacagcggccacatcggctggggagtcaacacgccc
gctcgcgaccactacgcagagcacccacgtttcgcgggtcagctcgtgctccagttcgaa
gacgggggagaggaggtgctggcgaccggcgccgattgggtcgcatcgaccggcggaact
cgagaagccgacttcttgcagggtgagaccttcgtggccgaggcggagccccaaggctgg
gacgctcctgggttcgatgactcggggtggtcgcccgtcgaggtcggtgcggacgtcgat
cccgtcgtgcagtggcaccccgcgcagccggtgcgggagctggagaccttcgagcccgtc
gaggtgaccgagccgacgcccggcgcctacgtgctaaacctcggtcagaacttcgctggc
gtcccgcggatccgcgtcaaaggcgcgaagccgggtcaggtgatcaagctccgcttcgcg
gagcgtttgaaccccgacggcaccgtctacctgacaaatatgcgcaccgcgcgggcgacc
gacacgtacgtttgccgcggcgacactgaggaaacctggcagccccggcacaccttccat
ggattccagtacatcgaggtgcgcggcctcggccacgccccgagttcagacgagatcgtc
ggcgtcgcgctcagcagcgacactccagcggtcggttcgttcgagtgttccgacgcgatg
ctgaatcagctcgtgagcaacgtctactggacgcagcggatgaacttcattgacatccct
accgactgccctcagcgtgacgagcggctcggctggacgggcgacgcccaggtgtacatc
gggaccgcgtgcctgaactgcgacgtccaggcgttcttcggcaagtggatgcaagacatg
ctcgactcgcagcgagccgatgggcagttcccgatgatctcgccgaccaaggtggccggt
gacgacggcggacccgcctgggccgacgccggggtgatttgtcccatgcagctctacgaa
acgtacggagaccgcgaattgctcgctaggcagtacccctcgatgaagcgcttcgtcgag
ttctgccggggtcgcagcaaagacggcgtgctgcctcccgatcaattccactgcttcggc
gactggttgagcgtcaacgccgatacgcccaaggatgtgatctacaccgcatactatgct
caatcgacacgtctgacggccgaagcggccgagattcttggtttctcgaccgacgccaaa
gagctgcgagcgcttcacaaacgcatcaagcaggcgttccagaaaaagttcgtgaaggac
ggtggacggatcgagggagacacacagtgctgctacgccttagcgctggcctacgggttg
gtcgacggcaaggaccgccaggccgcgtcccgctacttggtagaagacatcaagaaacgc
ggcggccggctctcgaccggctttatcggcacgaaggacctgatgctggtgctgtccaag
atcggccggcaagacgtggcctacgacctgttgttcagcgacaagttcccgggttgggga
ttctccatcaagcagggcgccacgagcatctgggaacgctgggacggctggacccccgaa
caggggttccagagcgcggggatgaactcgttcgcccactattcgttcggcgcggtctac
cgctggatggttgaaaacatcggcggcatccgccccacgtcgcccggctacgccacgctc
acgattgcgcccgaggtcaccgatcgactcgaatgggcgaagacttcctacgacagtgtt
cgcggcccgatcgccagcgattggcgtcgtgaggaaggccggtttctgctcaacgtaagc
gtgccggccaatacgacggctcagctgaggctgcccaagggggcgtccgccgacggattg
accgagagcggcaagccttggggcacctcgcgagacgaagacggcgtgacggtgctcgaa
atcgggagcggcgactaccgcttcgaggcgccgatgaagtag
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