Pirellulimonas nuda: Pla175_32000
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Entry
Pla175_32000 CDS
T06953
Symbol
hemY_2
Name
(GenBank) Protoporphyrinogen oxidase
KO
K00231
protoporphyrinogen/coproporphyrinogen III oxidase [EC:
1.3.3.4
1.3.3.15
]
Organism
pnd
Pirellulimonas nuda
Pathway
pnd00860
Porphyrin metabolism
pnd01100
Metabolic pathways
pnd01110
Biosynthesis of secondary metabolites
pnd01240
Biosynthesis of cofactors
Module
pnd_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Pla175_32000 (hemY_2)
Enzymes [BR:
pnd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.3 With oxygen as acceptor
1.3.3.4 protoporphyrinogen oxidase
Pla175_32000 (hemY_2)
1.3.3.15 coproporphyrinogen III oxidase (coproporphyrin-forming)
Pla175_32000 (hemY_2)
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
NAD_binding_9
Pyr_redox_2
Lycopene_cycl
FAD_binding_2
FAD_oxidored
Thi4
HI0933_like
Pyr_redox
AlaDh_PNT_C
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
QDU89804
UniProt:
A0A518DE92
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Position
complement(4062721..4064178)
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AA seq
485 aa
AA seq
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MDRFTGQRRVAVIGGGVSGLAAAHRLRRLAPGLDVRLLESGPRLGGVIRTHRESGFLIEG
AADNFITNPPHAVDLCHDLGLTDELIRTNPNGHGAMVVSRGRLEPIPPGFVVMAPSRVWP
LLSTRVLSPLGKLRSACELLAPRKRGGDDESLESFVTRRFGREMFERLVQPLVGGIYTAD
PARLSVAATMPRFLEMERKHGSLIRAMMAERRQRGQAREEHGGARYSQFMTLRGGMSRLI
DALGASLPADAVCHNAPVHALDHDGDGWRLSYGDGGRLDADAVVVACPAPQAAAIVRRVD
PTITRLLSQIEYASCAVVSLAFGRDQIRRPINAFGFVAPRIEGRRILSCSFSSEKYAGRA
PEGAVLMRVFIGGALQPGLLDSPDSGLVELACQELAALLRIRGGPILSHVTRQNHAMPQY
HLGHLDRVAQINQRLLARPTLALAGSALNGVGAPGCIASGQEAARRVVAAMESSPIGRAA
PGGVV
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtttcaccgggcagcgacgcgtcgccgtgatcggtggaggcgtctcagggcta
gccgccgcgcaccggctccgtcggctcgcaccggggctcgacgtccgtctgctggagtcg
ggcccgcgtctcgggggcgtgatccgcacgcaccgcgagagcgggttcctcatcgagggg
gcagcggacaacttcatcaccaacccgccgcacgcggtcgatctgtgccacgacctcggc
ctgaccgacgaactgatccgcaccaacccgaacggccacggcgcgatggtggtgagccgc
ggcaggctcgagccgatcccgccggggttcgtggtgatggctccttcgcgggtctggccg
ctgctctcgacgagggtgctgagcccgctgggcaagctgcgcagcgcctgcgagctgctg
gcgccgcgcaaacggggcggcgacgacgaatcgctggagtcgttcgtgacgcgtcggttt
gggagggagatgttcgaacggctcgttcagccgctggtggggggcatctacacggcggac
cccgcgcggttgagcgtcgcggcgacgatgcctaggttcttggagatggagcgcaagcac
ggaagcctcatccgagcgatgatggccgagcgtcggcagcgggggcaggcacgcgaggag
cacgggggcgcccgctacagccagttcatgacgctgcggggcgggatgtcgcgactgatc
gacgcgctgggcgccagcctcccggcggacgcggtctgccacaacgcgcctgttcatgcg
ctcgatcacgacggcgacggctggcggctgtcgtacggcgacgggggccggctcgacgca
gacgcggtggtggtagcgtgcccggcgccgcaggcggccgcgatcgtgcggcgggttgat
cccacgatcacgcggctgctctcgcagatcgagtacgccagctgcgcggtggtgtcactc
gccttcgggcgcgaccagatccgccggccgatcaacgcgttcgggtttgtggcgccccgc
atcgaaggccgccgaatcctctcgtgcagcttctcgagcgagaaatacgcgggacgcgcg
cccgagggcgccgttctgatgcgggtgttcattggcggcgcgctgcagcccggcctgctc
gactcgcccgacagcgggctggtggagcttgcctgccaagagctggccgcgctactgcgg
atccgggggggcccgatcctcagccacgtcacccgccaaaaccacgccatgccccagtac
cacctgggacacctggaccgcgtcgcccagatcaaccagcggttgcttgcgcgccccacg
ctcgcattggccggcagcgcgctgaacggggtgggggcgcccggctgcatcgcgagcgga
caagaagcggcgcgacgcgtggtcgccgcgatggagtcttcgccgatcggcagggcggcg
ccggggggagtcgtatga
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