Pirellulimonas nuda: Pla175_35540
Help
Entry
Pla175_35540 CDS
T06953
Symbol
sigA_3
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
pnd
Pirellulimonas nuda
Pathway
pnd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Pla175_35540 (sigA_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnd03021
]
Pla175_35540 (sigA_3)
Transcription machinery [BR:
pnd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pla175_35540 (sigA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
WDCP
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QDU90153
UniProt:
A0A518DF98
LinkDB
All DBs
Position
4494452..4496116
Genome browser
AA seq
554 aa
AA seq
DB search
MTQPTFDVNASLDHLVELAREQGCLYYHQLFPLLPDEIYGTERIDAVLAAIEQLGVEVRE
HPQFPTRREFEEPVLETAVDRSHLLHETLPKSGSDPIRMYLSQMAEIPLLTRDEEISLAK
KIELTRKRFRRNLLRSFYALEATVATLDRVNSGELPFDRTIKVSLTELLTKEQVSGRMPA
NLVTLRTLMAAQRQDFATLTSKSAEEEAKQAARKRYLRRRNKMLVLVEELSLRTKRVWPL
IGELEKISGRMTHLQQELRELKKTGASEGHIASVRGALRKLMQQTLESPASLARRVSELK
QQYRAFDNTKRDLCSGNLRLVVSIAKKYRNRGLSFLDLIQEGNTGLMRAVDKYEYRRGFK
FSTYATWWIRQAITRAIADQARTIRIPVHMIDVLTKLRNTAKRLQQELGREPTTEETALA
SGVSLEETERVMDIGRSPVSLDRPIGDGDDCCFGEFVEDHGAESPHKLANNSLLRERIEE
LLKTLTFREREIIRLRYGLVDGYSYTLEEVGRIFKVTRERVRQIEAKAVAKLQSPVRSQM
LACFVPEEPLVAAA
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgacccagccgacattcgacgttaacgcttccctcgatcacctggtggagctcgcccgc
gagcagggctgcctctactaccaccagctcttcccgctgctgccggacgagatctacggg
accgagcggatcgacgcggtgctcgccgccatcgagcaactgggagtcgaggtgcgggag
cacccgcagttccccacacggcgtgagttcgaagagcccgtgctcgagaccgccgtcgat
cggtcgcacctgctgcacgagaccctgccgaagtcgggcagcgaccccatccgcatgtac
ctgtctcagatggcggagatcccgctgctgacgcgggacgaagagatctcgctggccaag
aagatcgagctcacccgcaagcggttccgccgcaacctgctccgctcgttctacgccctg
gaggcgaccgtcgccacgctcgaccgcgtcaactcgggcgagctccccttcgaccgcacc
atcaaggtctcgctcaccgagctgctgaccaaggagcaggtctccggccggatgcccgcc
aacctggtgacgctccgcacgctgatggcggcgcagcggcaagacttcgccacgctgacc
agcaagagcgcggaagaagaagcgaagcaggccgcgcggaagcggtacctgcgtcgtcgc
aacaagatgctggtgctggtcgaagagctcagcctccgcaccaagcgggtctggccgctc
atcggcgagctcgagaagatctccggccggatgacgcacctgcagcaagagctgcgcgag
ctgaagaagaccggagcctccgaggggcacatcgcctcggtccggggcgcgctgcggaag
ctgatgcagcagacgctcgaatcgccggccagcctggcccggcgcgtttcggagctgaag
cagcagtaccgcgcgttcgacaacaccaagcgcgacctgtgcagcggcaacctccgtctg
gtggtgtccatcgccaagaagtaccgcaaccgcgggctgagcttcttggacctgatccag
gaaggcaacaccgggctgatgcgggcggtagacaagtacgagtaccgccgcggcttcaag
ttcagcacctacgccacgtggtggatccgccaggccatcacccgcgccatcgcggaccag
gcccgcaccatccgtatcccggtgcacatgatcgacgtgctcaccaagctgcggaacacg
gccaagcgattgcagcaagaactcggccgtgagccgacgaccgaagaaaccgccctggcc
tctggcgtgagcctggaagagaccgagcgcgtgatggacatcggccgcagcccggtgagc
ctcgaccgcccgatcggcgacggcgacgactgctgcttcggcgagtttgtcgaggaccac
ggcgccgagagcccccacaagctggccaacaacagcctgctgcgggagcggatcgaggag
ctgctcaagacgctcaccttccgcgagcgggagatcatccgcctgcggtacggcctggtg
gacggctacagctacacgctggaagaagtgggccggatcttcaaggtcacccgcgaacgc
gtccgtcagatcgaggccaaggcggtcgccaagctgcagagccccgtccgcagccagatg
ctggcctgcttcgtcccggaagagccgctggtcgcggcggcctag
DBGET
integrated database retrieval system
