Pirellulimonas nuda: Pla175_36990
Help
Entry
Pla175_36990 CDS
T06953
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pnd
Pirellulimonas nuda
Pathway
pnd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pla175_36990 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnd03019
]
Pla175_36990 (groL)
03110 Chaperones and folding catalysts [BR:
pnd03110
]
Pla175_36990 (groL)
03029 Mitochondrial biogenesis [BR:
pnd03029
]
Pla175_36990 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnd04147
]
Pla175_36990 (groL)
Enzymes [BR:
pnd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Pla175_36990 (groL)
Messenger RNA biogenesis [BR:
pnd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Pla175_36990 (groL)
Chaperones and folding catalysts [BR:
pnd03110
]
Heat shock proteins
HSP60 / Chaperonin
Pla175_36990 (groL)
Mitochondrial biogenesis [BR:
pnd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Pla175_36990 (groL)
Exosome [BR:
pnd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Pla175_36990 (groL)
Exosomal proteins of other body fluids (saliva and urine)
Pla175_36990 (groL)
Exosomal proteins of breast cancer cells
Pla175_36990 (groL)
Exosomal proteins of colorectal cancer cells
Pla175_36990 (groL)
Exosomal proteins of bladder cancer cells
Pla175_36990 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
QDU90296
UniProt:
A0A518DFQ1
LinkDB
All DBs
Position
4683358..4685058
Genome browser
AA seq
566 aa
AA seq
DB search
MVFDEDARRPLAAGVEKLARAVRSTLGPRGRNAVLDKGWGSPKVTKDGVTVAEDIELSDP
YENLGAQLVKEAASKTNDIAGDGTTTATVLAQGIFSEGLKMIAAGADPMALGRGIQRAVA
AVSEQLTKLSEPVDIKNKKSLQQVATIAGNNDPEIGKVLADAFTQVGKNGVITVDEGRGA
ETTVEVVEGMQFDRGYLSPHFVTNEDDMEAELENCQILVFEEKISSAKTMVPLLEAVSKS
GRPLLIIAEDVDGEALATLVVNKMRGIVSVCAVKAPGYGDRRKAMLGDIATLTSGTAIFK
DLGIKLDGVQLSDLGKAKKVIVSGDKTTIVGGGGSKDAISGRADQIRREIENTDSDYDRE
KLQERLAKLAGGVAQIKVGAATESEMKEKKALFDDARSATQAALEEGIVPGGGVALLRCE
KVLDKVAKELEGDEAMGVLLVKNVLDYPLKYIAENAGVDGAVVVNRVRKLKDKNEGYNAD
KDEYCNLVEAGVIDPAKVTRTSLQNAASVAALLLTTDSLITEIPKEEEEGGHDHGHDHGM
GGMGGMGGMGGGMGGMGGMGGMPGMM
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggtctttgatgaggacgcccgtcgcccactagcggccggtgtcgagaaactggcccgc
gccgtccgcagcacgctgggcccccgtggccgcaacgcggtgctcgacaagggctggggc
tcgcccaaggtgaccaaggacggcgtaaccgtcgccgaggacatcgagctgagcgacccc
tacgagaacctgggcgcccagctggtgaaggaagccgccagcaagaccaacgacatcgcg
ggcgacggcaccaccaccgccaccgtgctggcgcagggcatcttcagcgaaggcctgaag
atgatcgccgccggcgccgacccgatggccctgggccgcggcatccagcgggccgtggcg
gctgtgagtgagcagctcaccaagctctccgagccggtcgacatcaagaacaagaagagc
ctgcagcaggtcgccaccatcgcggggaacaacgaccccgagatcggcaaggtgctggcg
gacgccttcacgcaggtcggcaagaacggcgtcatcaccgtcgacgagggccgcggcgcc
gagaccaccgttgaggtggttgaggggatgcagttcgaccgcggctacctgtcgccccac
ttcgtcaccaacgaagacgacatggaggccgagctggagaactgccagatcctggtgttc
gaagagaagatctccagcgccaagacgatggtgccgctgctcgaagcggtctccaagagc
ggccgcccgctgctgatcatcgccgaagacgttgacggcgaggcgctggccaccctggtg
gtcaacaagatgcgcggcatcgtcagcgtctgtgcggtgaaggcccccggctacggcgac
cgccgcaaggcgatgctgggcgacatcgccacgctcacctcgggcaccgccatcttcaag
gacctggggatcaagctggacggcgttcagctatccgacctgggcaaggccaagaaggtg
atcgtctccggcgacaagacgacgatcgtcggcggcggcggctccaaggacgccatcagc
ggccgggccgaccagatccgtcgtgagatcgagaacaccgacagcgactacgaccgcgag
aagctgcaagagcggctcgcgaagctcgccggcggcgtggcccagatcaaggtgggcgcc
gcgaccgagagcgagatgaaggagaagaaggcgttgttcgacgacgcccgctccgccacc
caggcggccctggaagaggggatcgtccccggcggcggtgtggccctgctgcgctgcgaa
aaggttctcgacaaggtcgccaaggagctcgaaggcgatgaagcgatgggcgtgctgctg
gtcaagaacgtgctggactacccgctgaagtacatcgccgagaacgccggcgtcgacggc
gccgtggtggtcaaccgcgtccgcaagctcaaggacaagaacgagggctacaacgcggac
aaggacgagtactgcaacctggtcgaagccggcgtgatcgaccccgccaaggtgacccgc
acctcgctgcaaaacgccgcgagcgtagcggccctgctgctcaccaccgactcgctgatc
accgagatccccaaggaagaagaggaagggggtcacgaccacggccacgaccacggtatg
ggtggcatgggcggaatgggtggcatgggcggcggcatgggaggaatgggcggcatgggc
ggcatgccggggatgatgtag
DBGET
integrated database retrieval system
