Pirellulimonas nuda: Pla175_39210
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Entry
Pla175_39210 CDS
T06953
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pnd
Pirellulimonas nuda
Pathway
pnd00521
Streptomycin biosynthesis
pnd00523
Polyketide sugar unit biosynthesis
pnd00541
Biosynthesis of various nucleotide sugars
pnd01100
Metabolic pathways
pnd01110
Biosynthesis of secondary metabolites
pnd01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Pla175_39210 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Pla175_39210 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
Pla175_39210 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Pla175_39210 (rfbB)
00525 Acarbose and validamycin biosynthesis
Pla175_39210 (rfbB)
Enzymes [BR:
pnd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Pla175_39210 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
QDU90515
UniProt:
A0A518DGB1
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All DBs
Position
4984287..4985306
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AA seq
339 aa
AA seq
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MAGVRDGVSGGPRLLVTGGCGFVGRALVRRALAERGARVLNLDLMTYAARREPAADCRLV
EGDIADGVLVSRLIDEFRPTAIVNLAAESHVDRSIVGPDPFVHTNIVGVHVLLKSALDHF
RRLDAEGQRRFRFVQVSTDEVYGSIDPPGRFTEDSPYRPNSPYAASKAAGDCLVRAYHQT
YGLPTVTTHGSNNYGVGQHPEKLIPKMICQALAGGPLPIYGDGRQVRDWLHVDDHCEAIW
QALEQGGPGEHYNIGAGCELTNLEVVDEVCDAVDRLRPRSAGASTRQQIAFVADRPGHDR
RYAVDSSKASTQLGWRPRRTFAEGLKEIVLAEIAQPSAQ
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgttcgcgacggggttagcggcggcccccgcctgctggtgacggggggctgc
gggttcgtcggccgggcgctggtgcgccgggcgttggcggagcgcggcgcacgcgtgctg
aacctggacctgatgacgtacgcagcgcggcgcgaacccgccgccgactgccgcctggta
gaaggcgacatcgccgacggcgtgcttgtctcgcggctcatcgacgagttccggccgacg
gcgatcgttaacctggcggccgagtcgcacgtcgaccgctcgatcgtggggcccgacccc
ttcgtccacacgaacatcgtgggggtccacgtcctgctcaagagcgccctcgaccacttc
cggcgcctggacgccgagggccaacgccggttccgcttcgtgcaggtgtcgaccgacgaa
gtgtatggctcgatcgatccgccgggccggttcaccgaagactccccctaccggcccaac
tcgccgtacgccgcctcgaaggccgcaggggactgcttggtgcgtgcgtaccatcagacg
tacgggctgccgaccgtcacgacgcacgggtcgaacaactacggcgtcggccagcacccg
gagaagctcatcccgaaaatgatctgccaggcgctggcgggcgggccgctgccgatctat
ggcgacgggcggcaggtccgcgactggctgcacgtcgacgaccactgcgaggcgatctgg
caggcgctcgagcaaggcgggccgggagagcactacaacatcggcgccgggtgcgagctg
acgaacctggaagtagtggacgaggtctgcgacgccgtcgaccggctgcggccccgcagc
gccggcgcgagcacgcgccagcagatcgcgtttgtcgccgatcgccccgggcacgaccgc
cgctatgcggtcgattctagcaaagctagcacgcagctcgggtggcgcccccggcgcacg
tttgccgagggattgaaagagattgtgctcgcagaaatagcccaacctagcgcccaatag
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