Pirellulimonas nuda: Pla175_42300
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Entry
Pla175_42300 CDS
T06953
Symbol
cnrH_2
Name
(GenBank) RNA polymerase sigma factor CnrH
KO
K24073
RNA polymerase sigma factor CnrH
Organism
pnd
Pirellulimonas nuda
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnd03021
]
Pla175_42300 (cnrH_2)
Transcription machinery [BR:
pnd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pla175_42300 (cnrH_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_38
HTH_Tnp_1
Phage_antitermQ
HTH_10
Phage_P2_GpE
Motif
Other DBs
NCBI-ProteinID:
QDU90817
UniProt:
A0A518DH69
LinkDB
All DBs
Position
complement(5346254..5346784)
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AA seq
176 aa
AA seq
DB search
MEASLKAADEFVRLFSLNEKTVRRYAMSLLADWSAVDDVMQNASIAMLRKFDEYDPAQPF
AGWACRFAYYEVLEWRRRAAKRRCFSLSTIELLADRPAEFPREAESRLNSLRQCMAKLSE
PDVELIKLRYATSRSVREVASTMGVTAKNLYKKLARIRRNLLACIENTATREEAAG
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggaagcatcactcaaggcagccgatgagtttgtgcggctcttctcgttgaacgagaag
acggtgcggcgctacgccatgtcgctgctggccgactggagcgccgtcgatgatgtgatg
caaaacgcgtcgatagcgatgctccgaaaattcgacgagtacgacccagcgcagcccttt
gccggttgggcgtgccgcttcgcctactatgaagtactggagtggagacggcgcgcagcg
aagcggaggtgcttctccctctcaactatcgagctgctggcagacaggcctgcggagttc
cctagggaggccgagtcgcggctcaattcgttgaggcagtgcatggcgaagctaagcgag
ccggacgtggagctcattaagttgagatatgcgacgagccggagcgttcgggaagtggcc
agcaccatgggagtgacggcgaagaacctgtacaagaaactggcaagaatccgccggaac
ctgctcgcgtgtattgagaacaccgctacgcgggaggaggctgccggatga
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integrated database retrieval system
