Pirellulimonas nuda: Pla175_42730
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Entry
Pla175_42730 CDS
T06953
Name
(GenBank) hypothetical protein
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
pnd
Pirellulimonas nuda
Pathway
pnd00900
Terpenoid backbone biosynthesis
pnd01100
Metabolic pathways
pnd01110
Biosynthesis of secondary metabolites
pnd03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Pla175_42730
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Pla175_42730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pnd03011
]
Pla175_42730
Enzymes [BR:
pnd01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
Pla175_42730
Ribosome [BR:
pnd03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Pla175_42730
Bacteria
Pla175_42730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
RNase_II_C_S1
Fn3-II_PB4
Motif
Other DBs
NCBI-ProteinID:
QDU90860
UniProt:
A0A518DHA7
LinkDB
All DBs
Position
complement(5400170..5401915)
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AA seq
581 aa
AA seq
DB search
MSEELKPEASGPVASDPSGPQQVEGAPPAGQPQEAAPEQAAPEQAAMPRPDEPAPAEAPA
AQPSVDPAPVADQSVEQAPGQSALPTPAADQGSFEPVHIEPAPVVSEMVSEALASATGTE
PTADDARPSERIKIGGRTVDEPAVAKPVSPGPAGDRPREPSSPPPGKYPPPNIRSQLSDD
LQAEFDAMVAGQEVGEILDNASSREAVREIAAETRLTCTISKIHGEDVFVDLGGVKQGLL
PMRQFGETPPEVGAQVEVVVIKLNADEGYYEVTMPTGTVDVGNWDEVQEGQVVEVNITGV
NKGGLECQVAGIRGFMPMGQISIYRVEQPEEYVGQRLSCVITEAKKSRKNLVLSHRALME
RERAENREKLLAEIAPGQTREGVVRSLRDFGAFVDLGGVDGMVHVSKLSWERVNHPKDVL
TEGQTIKVKVEKIDRETGKIALSYRESVANPWETVESDFPVGSNAKGTVSKTMDFGAFVR
LAPGVEGLIHISELDHGRVMRTTDVVTEGQQVEAKVVSVDLEKQRIGLSLRALKARPERE
QSRPEPEAEPEPQENRPRMDRSKLKGGMSHKSGGDKFGLRW
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagagttgaagccggaagcgtctggtcccgtcgctagcgacccgtctggtccc
cagcaggtcgaaggggcgccccccgcggggcagccgcaggaggccgcccccgagcaggca
gcccccgagcaggccgccatgccgcggcccgacgagcccgcgccagccgaggcccccgcg
gcgcagccgtcggttgatccggcgcccgtcgctgatcaatccgttgagcaagcgccgggt
caatccgctttgccgacgcccgcggctgaccagggctcgttcgagccggtgcatatcgag
ccggcgccggttgtcagcgagatggtgtccgaagcgctcgccagcgcgacggggaccgag
ccgaccgcagacgacgcccgtcccagcgagcggatcaagatcggcggtcgcacggtagat
gagcccgctgtcgccaagccggtgtcgcccggccccgccggtgacaggccgcgcgagccc
agctccccccctccgggcaagtaccccccaccgaacatccgcagccagcttagcgacgac
ctgcaggcagagttcgacgcgatggtcgccgggcaagaagtgggcgagatcctcgacaac
gcctcttcgcgcgaagcggtccgcgagatcgcggccgagactcgcctcacctgcaccatc
agcaagatccacggcgaagacgtgttcgtcgacctcggcggcgtcaaacaggggctgctg
ccgatgcggcagttcggcgagaccccgccggaggtgggcgcccaggtcgaagtggttgtc
atcaagctcaacgccgacgagggctactacgaagtcacgatgccgaccggcacggtcgac
gtcggcaactgggacgaggttcaagagggccaggtcgtagaggtcaacatcaccggcgtg
aacaaggggggcctggagtgccaggtggccggcatccgcggcttcatgccgatggggcag
atctcgatctaccgcgttgagcagcccgaggagtacgtcggtcagcggctgagctgcgtg
atcaccgaggccaagaagagccgcaagaacctggtgctcagccaccgtgcgctgatggag
cgcgagcgggccgagaaccgcgagaagctgctggcggagatcgcccccggccagacccgc
gaaggggtggtccgcagcctccgcgactttggcgcgtttgttgacctggggggcgtcgac
ggcatggtgcacgtcagcaagctgagctgggagcgggtgaaccaccccaaggacgtgctc
accgagggtcagacgattaaggtcaaggtagaaaagatcgaccgcgagaccggcaagatc
gcgctgagctaccgcgagtcggtcgccaacccctgggaaacggtcgagagcgatttcccg
gtcggctccaacgccaaggggaccgtctcgaagacgatggacttcggcgcctttgtccgg
ctggcgccgggcgtcgaggggctgatccacatctcggagctcgaccacggccgggtgatg
cgcacgaccgacgtcgtgaccgagggccagcaggtcgaggccaaggtggtgagcgtcgac
ctggagaaacagcggatcggcctgtcgctgcgggcgctcaaggcgcggcccgaacgggag
cagtcccgccccgagcccgaggcagaaccggagccgcaggagaaccgcccgcggatggac
cgttcgaagctcaagggggggatgagccacaagtcgggcggcgacaagttcggcctgcgt
tggtag
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