Pirellulimonas nuda: Pla175_43170
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Entry
Pla175_43170 CDS
T06953
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
pnd
Pirellulimonas nuda
Pathway
pnd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pla175_43170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
He_PIG
RibLong
MalQ_N
FlgD_ig
Motif
Other DBs
NCBI-ProteinID:
QDU90904
UniProt:
A0A518DHF8
LinkDB
All DBs
Position
5451419..5455672
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AA seq
1417 aa
AA seq
DB search
MHFDGGAGDDTFELSQTSSNSTVTIYDASGTSDTLDLGTLIPTSSAITDLAAGKSYTFGL
VTVDGATASIESVDPDVHSPVSDAPYFEETLPQKVLEYGAPITFDVELPAGFSVEIEAGA
PAGVTLSGSGGQRTLTAGASLDPGYHRITLLAKDGAGNEQDRVWLFARGTSGDSSPWFNG
YDALSGGTLSGDDFTIDEGEAFSVEVGFTNASSFALAPGFPRGAAIDPTTGEFSWTPTED
QDAAEPYEITVLAASGGDRPLQARKTFFVQVQEVASFPVFVAGTVGLPYLKDEVNETTAD
ATIVGEVVGDGSLEFVDVEATFSSGSTVYVPLDTDPDDPSRGRFVIEPRLGLELTADEVN
TVTLRLREWKRDQNGQYGYEFPDPVDQSSAIAELEFTPTTTHDPPEFDPADPVRLKHDTG
ADDTDGETVDPTIVGGIINDGRRDGHKVLVYDGPKSAGILLGSTQTDAEGRFEFTPRGLS
PGLMKTLDVVVEERAPLAELGSVEELTGMVPVKLVEGGLPTIGPLGFSNHTGFVDPSGLV
RLGPVVEGTLVNPNGEPYPVDGVVVQFVIAPPDDPGATTLEYTAPSDAQFAASTLAAVSN
STGAFSVLLPERDLAQKRVWARAVGWDNYAQKLLSGDEEDYAFVDIDASIDAPAQAPGQP
ALSLRYSTGGSVSDPTINATVVANGPTSNIIVRFYRGSIDAGVIAASTPVTNEPVNFLGW
TPLGADGIAHFTPVGLTPDEGTDIVAVATRVSATGAGQSSGASAPLSVTLADAPSVGLSA
PLLLAYETAVGSGVTADPVIEGTVTYAGDKTRLVVEYEIVGGNEPIVGTVKPDANGKFGF
TPVGLTPPQGGYDIGQYGHRYQVRVRVRVPDYSAPMPLFDGNDVAWYGSAVVYGQGTTDW
DATTVDGWLDSVIAPGGLNASDPWLASSFDRDWSNQVSGFTGAWSLPLGFTYDPLIGAAS
LDDGGLSLASLTLPEPAGSPVIVGTLGRVAGSGGVEGLTVKVSLGRGTGDFEFDGETTTG
EGGAFSYAAQYYWPGEINRVRIEVYATPYGAAAPEKLVEFETYDDDPIEIAPAVDTGLVV
AELALRSPVPGSPTLSAIDPTLKGSIAGPAELALRRVEFDYDGDGQADDATLTDALGGFD
FFPTHLTAQAGVPSVVRARLVGTAVDAATQVEHTTYGAWNEVEFTLLPTPDVAYLSLLND
TGKREGTGTEPIRILDRITSDPTLHGYVGDGSSEGYYTVEFDHDGDGVADGRTSTDASGY
FRYEPEDLANGYHNIRARVVKLLAADGGPTATWTPVTATGNVNDGFGIWVVPPAIVQVTE
VSLANPSSSIDPTLRGAVVANPGPDAYPAENTLVEFFYDANGNGVIDPDSAADFKLGETT
TDGDGQFTFVPVGLPFDSVKVLARVGQSVRSTDHDRL
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgcattttgatggaggggcgggagacgacacgtttgagctgtcgcagacgtcctcgaac
tccacggtgacgatctacgacgcgtccgggacgagcgacacgctagacctggggaccctt
attccgacgtccagcgctatcactgacctagcggccgggaagtcctacacattcggcttg
gtcaccgtcgacggcgcgaccgcatcgatcgagtcggtcgacccggatgtccattctccg
gtctctgatgctccctacttcgaagagacgctcccgcagaaggtattggagtacggcgcc
cccatcaccttcgacgtggaactcccggctgggttctccgttgagatcgaagcgggcgcg
ccggcgggggtgacgctttctggcagcggcgggcagcgcaccctcacggcaggtgcatca
ctggacccgggttatcaccggattaccctgttggccaaggacggagcggggaacgagcag
gaccgggtctggctgttcgcacgcggcacatcaggcgattcgtccccgtggttcaatggg
tatgacgcgctcagtggcggcacgctgagcggggatgacttcaccatcgacgagggtgag
gcgttctcggtagaagtcgggttcaccaacgcgtcgagcttcgccctggcgccgggcttc
ccccgcggtgcggccatcgaccccacgacgggggagttctcgtggaccccgacagaagac
caggacgcggccgagccttacgagattacagtcctcgctgcgagtggcggggatcgcccg
ctgcaagcccgcaagacgttcttcgtacaagtccaggaggtcgcgtccttcccggtgttc
gtggccggcacggtcgggcttccatatctcaaagatgaggtcaacgagaccaccgccgac
gcgacgatagtcggcgaggttgtcggtgacggatcgctcgagtttgtggacgtggaagcg
accttcagctcgggaagcacggtctatgtgccgctcgacaccgaccccgacgacccctcg
cgtggccggttcgtgattgagccgcgtttgggactcgaattgacggcggacgaagtgaac
acggtcacgctgaggctccgagagtggaagcgagatcagaatggtcagtacggttatgaa
ttccctgatcctgtcgatcagagctctgcgatcgcagagctcgaattcacgccaacgacc
acgcacgacccgccggagttcgatcctgcggatccggttcggctcaagcatgacaccggc
gccgacgacaccgacggtgaaaccgtagaccccacgattgtcggcggcatcatcaacgat
ggacgccgcgacgggcacaaggtcctcgtgtacgacggcccgaaaagcgccggaatcctg
ctcggctcgacgcagaccgacgcagagggccgatttgagttcacgccgcgagggctatcc
ccggggctgatgaagacgctcgatgtcgtcgtcgaagaacgggcgccgctggctgagtta
gggtcggtcgaagagttgacgggcatggtaccggtgaagctagtcgagggagggctgcca
acgatcggtccgctagggttctcgaaccatacgggtttcgtcgaccccagtggcctcgtg
cgtctgggcccggttgtcgagggcacgctcgtcaatcccaacggcgaaccctacccggtc
gatggcgtggtcgttcagttcgtaattgctccgccggacgacccgggagcgacgacgctg
gagtacacggcgccgagcgatgcgcagttcgctgcctccacgctggccgcggtgtccaac
agcacaggagcgttcagcgtcttgttgccagaacgtgacctcgcccaaaagcgcgtctgg
gcgagggcggttggctgggacaactacgcgcaaaagcttctttctggagacgaagaagac
tatgcctttgttgatatagacgcctcaattgacgcgcccgcacaagccccgggccaaccg
gcgctatccctgcgctattccacggggggttccgtcagcgatccgacgatcaacgccacg
gtcgttgccaatgggccgaccagcaacatcattgtccgcttctaccgtgggtcgattgac
gcgggagtgattgctgcatcgacccccgtcacgaacgagccagtgaacttcctcggctgg
accccgctcggcgcagatgggatagcccactttacccctgttggcctgacgcctgacgaa
gggacggacatagtcgccgtggcgactcgggtatccgccacgggcgcaggtcagtcgagc
ggggcgtcggcccccctttcggtgaccctggccgacgccccgtcggtcggcctctctgcc
ccgctgctgttggcgtacgaaaccgccgtcggttccggcgtcactgccgatccggtaatc
gaggggacggtcacgtacgccggcgataagacccggctggtcgtggagtacgagatcgtc
ggcggcaatgaacccatcgtagggacagttaagcccgacgcgaacggcaagttcgggttc
acgccggtcggattgacgccgccacagggcggctacgacataggccagtacggtcaccgc
taccaggtccgcgtccgtgtccgagttccggattactccgccccgatgccgctcttcgac
gggaacgacgtggcgtggtacggcagcgcggtggtgtacggccaggggaccactgactgg
gacgctacgacggtcgatggatggctcgacagcgtgattgccccaggcggcctcaacgca
tcggacccatggctcgcctcgtccttcgaccgcgactggtcgaaccaagtcagtggcttc
acgggcgcttggtctttaccgctcgggttcacgtacgatccgctcataggggccgcttcc
ctggacgacggcggcctgtcgctcgcgtcgctcacgctccccgaaccagcgggatcgcct
gtgatcgtcggcacgcttggccgcgtcgcgggctcgggcggcgtcgaggggctcaccgtg
aaggtgtcgcttggacgagggacgggcgacttcgagttcgatggcgagaccacgacgggc
gaagggggagcgttcagctacgccgcccaatactattggccgggcgaaatcaaccgggtg
cggatcgaggtttacgcgaccccgtacggcgccgctgctcccgaaaagctggtcgagttc
gaaacctatgatgacgacccgatcgagattgccccggcggttgacacgggacttgtcgtc
gccgagctggcgctgcgctcgccggtccccggttcaccgacgctctcggcgatcgacccc
acgctcaagggcagcatcgcgggcccggcggagctcgctctgcggcgggtcgagttcgac
tacgacggcgacggccaagccgacgacgcgacgctgaccgacgcgctggggggcttcgac
ttcttccccacccacctcacggcccaggcgggcgtccccagcgtcgtacgcgcacggctg
gttgggacggcggtcgacgctgctacccaggtcgagcacaccacctacggggcgtggaac
gaggtcgagttcaccctgttgccgacgccggacgtcgcctacctgagtctgctcaacgat
acgggcaagcgtgagggcaccggtacggagccgatccggattttggaccgcatcacgagc
gaccccacgctgcacggctacgttggcgacggtagttccgagggctactacaccgtcgag
ttcgaccacgatggcgacggcgtcgcagacggacgcacatcgaccgacgccagcggctac
ttccgctacgagcctgaagatctcgctaacggctaccacaacatccgcgcccgggtggtg
aagctgctcgccgccgacggcgggcccacggcgacttggacgccggtgacggcgaccgga
aacgtaaatgatgggtttgggatttgggtcgtcccaccggctatcgtacaggtcacagag
gttagtctggcgaatccaagcagttcgatcgatccgacgctcaggggcgccgtcgtagct
aaccctgggccggatgcctatcctgccgaaaacacgcttgtggagttcttctacgacgcg
aacggaaacggggttatcgatcccgattccgctgctgatttcaagctcggcgagacgacg
acggacggtgacggacagtttacgttcgttccggtggggctcccgttcgattctgtcaag
gtgctcgccagggtcgggcagtcggtgcgatccaccgatcacgatcgcctttag
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