Pirellulimonas nuda: Pla175_44680
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Entry
Pla175_44680 CDS
T06953
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pnd
Pirellulimonas nuda
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnd03016
]
Pla175_44680 (truB)
Enzymes [BR:
pnd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Pla175_44680 (truB)
Transfer RNA biogenesis [BR:
pnd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pla175_44680 (truB)
Prokaryotic type
Pla175_44680 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QDU91051
UniProt:
A0A518DHU1
LinkDB
All DBs
Position
complement(5671508..5672425)
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AA seq
305 aa
AA seq
DB search
MYRCSNAAYQANPVFGLLNLNKPAGWTSRDVVNRVERLVGPARAGHAGTLDPLATGVLVV
CVGTATRLIQHVQRLPKRYVATFLLGRRSPSDDVELEPEIIADAPRPSIEEIEQAIPGFI
GDLNQTPPIYSAIKVAGQTSYNLARQGESFSLPPRPVTVYQLSVIRYDYPELVLDIHCGS
GFYVRALGRDLAASLGTGAVMSGLVRTAIGQLRVEQAVAAEALLETPIAERLISPRLLFK
DEECLFCNEAELEELRFGRPVTGDCPGPGDGPWGVIGPDGRLAAMVRLKPDGKLWPKHVF
EHAHC
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgatgctccaacgccgcctaccaagctaaccccgtgtttggactactgaacctc
aacaaaccggccggctggacctcgcgcgatgtggtcaaccgcgtcgagcggctggtggga
cccgcccgggccgggcacgccggaacgctcgacccgctcgccaccggggtgctggtggtg
tgtgtggggacggcgacccggctgatccagcacgtccagcggctgccgaagcggtacgtg
gctacgttcttgctggggcgccgcagccccagcgacgacgtcgagctggagcccgagatc
atcgcggacgcgccgcgcccgtcgatcgaggagatcgaacaagcgatccccggcttcatc
ggcgacttgaatcaaacgccgccgatttactcggcgatcaaggtagcgggccagacctcc
tacaacctggcccgccaaggggagtcgttctcgctccccccccgccccgtcacggtctac
cagttgtcggtaatccgctacgactaccccgagctggtgctggacatccattgcggaagc
ggcttctacgtgcgggcgctcggacgcgacctggccgcgtcgctgggcacgggggcggtg
atgagcgggctggtgcggaccgccatcggccagctccgggtcgaacaggcggtcgccgcg
gaagcgctgcttgagacgccgatcgcggagcggctgatctcgccgcggctgttgttcaag
gacgaggagtgcttgttctgcaatgaagcagagctggaagagctgcgttttggccggccc
gtgaccggcgactgcccgggccccggcgacgggccgtggggggtgatcggccccgatggc
cgcttggcggcgatggtgcgtttgaagcccgacgggaagctgtggcccaagcacgtgttt
gagcacgcccactgttga
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