Pirellulimonas nuda: Pla175_45730
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Entry
Pla175_45730 CDS
T06953
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pnd
Pirellulimonas nuda
Pathway
pnd03420
Nucleotide excision repair
pnd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pla175_45730 (pcrA_2)
03430 Mismatch repair
Pla175_45730 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnd03400
]
Pla175_45730 (pcrA_2)
Enzymes [BR:
pnd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pla175_45730 (pcrA_2)
DNA repair and recombination proteins [BR:
pnd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pla175_45730 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
Pla175_45730 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QDU91153
UniProt:
A0A518DI42
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All DBs
Position
5786032..5788146
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AA seq
704 aa
AA seq
DB search
MPPDPGLNPAQRDAVATLSGPLLVLAGAGTGKTRVVTFRIAALVRSGIRPDRILAVTFTR
KAAGEMQQRAGALLKPPGRGRNAPKPVVPEISTFHSLCVRVLRRHITRLGYPAAFTIADR
SDQEAQARAALREIRAPGDSLKPADLLGHISRWKMRTVRPEDATSAAETDREHLAAIAYR
RYQNNLKKGAVVDFDDLLYLTEELFAKFPSVRRDEAGRFDHVLVDEYQDTNHSQYEIVRG
LAMGHRNLCVVGDDDQSIYAWRGAEVTHILRFKQDWPDAKVVRLEENYRSRASIIGYANA
LIAFNRQRHDKVLRPAREPGERPRILQCKDETEEALQVVQDIRGKLLAGGWRPDGSSPGE
LSPFVERVAPKDIAILFRTNEQPRAFETELRAAKLPYILIGGMSFFDRKEVRDLLAYLRL
IANPEDEPSLLRVLNTPPRGIGDAARKALMQTAVTRGHGLWRVLPGCRMIDGVSDAAAGG
AQRLIDLVQGWQADQDRPLEHLVRRVIDETRYLHELARLYPDPDERDTRTASLDEVVNAA
AAFQSKSSQRRRPRKPAEPGGAGSPLQEFLDEVAVGGRDDADDKQSQLKRNAIALMTLHA
AKGLEFPHVYLVGMEEGILPHKRSLEAGEDSIDEERRLAYVGVTRAQDDLTLTLALSRRK
WGKPRDSIPSRFLYEMTGQADNPRYAEVKSGRAAKAAARGQGRR
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcccccagatccaggcctcaacccggcccaacgcgacgcggtggccaccctttccggg
ccgctgctggtgctcgccggcgccggaaccggcaagacccgcgtggtcaccttccgcatc
gcggccctggtgcgtagcggcatccggcccgaccgcatcttggccgtcacgttcacccgc
aaggccgccggcgagatgcagcagcgggccggcgccctgctcaagccccccggacgcggc
cgaaacgcccccaagccggtcgtgccggagatcagcacgttccactcactctgcgtccgc
gtgctgcggcgccacatcacgcgtttgggctacccggccgcgttcaccatcgcggaccgc
agcgaccaggaagcccaggcccgggccgcgttgcgggagatccgcgccccgggcgactcg
ctcaagccggccgacctgctggggcacatcagccggtggaagatgcgcaccgtgcggccc
gaggacgccaccagcgcggccgagaccgaccgcgaacacctggccgccatcgcctaccgc
cgctaccagaacaacctgaagaagggggcggtggtcgactttgacgacctgctgtacctc
accgaagagctgttcgccaagttccccagcgtccgccgcgacgaggcgggccggttcgac
cacgtgctggtagacgagtaccaggacaccaaccacagccagtacgagatcgtccgcggc
ctggcgatggggcaccgcaacctgtgcgtggtgggggacgacgaccagtccatctacgcc
tggcgcggcgccgaagtgacgcacatcctccgcttcaagcaggactggcccgacgccaag
gtggtgcggctagaggaaaactaccgctcgcgggcgtcgattatcggctacgccaacgcg
ttgatcgcgttcaaccgccagcggcacgacaaggtgctgcggcccgcccgcgagccaggc
gagcgcccccgcatcttgcagtgcaaggacgaaaccgaagaagccctgcaggtggtgcaa
gacatccgcggcaagctgctggccggcggctggcggcccgacgggtcgagccccggcgag
ctctcgccgtttgtcgaacgtgtggcgcccaaggacatcgctatcctgttccgcaccaac
gagcagccgcgggcgttcgagaccgaattgcgggcggccaagctcccgtacatcctcatc
ggcggcatgagcttcttcgaccgcaaggaggtgcgcgacctgctggcctacctgcggctg
atcgccaacccagaggacgagccctcgctgctgcgcgtgctcaacacgccgccgcgcggc
atcggcgacgcggcccgcaaggcgctgatgcagaccgccgtgacgcgtggccacgggctg
tggcgcgtgctgccgggctgccggatgatcgacggcgtgagcgacgccgcggccggcggc
gcccagcggctgatcgacctggtgcagggttggcaggcagaccaggaccgcccgctggag
cacctggtgcgccgcgtgatcgacgaaacccgctacctccacgagctcgcccggctctac
cccgaccccgacgagcgcgacacgcgcacggcgtcgctggacgaagtagtgaacgccgcg
gccgcgttccaatctaagagcagccaacgccgccggccacgcaagcccgccgaaccgggg
ggcgcaggctcccccctccaggagttcctcgacgaagtggcggtcgggggccgcgacgac
gccgacgacaagcagtcgcagctcaagcgcaacgcgatcgcgctgatgacgcttcacgcg
gccaaggggctagagttcccccacgtctacctggtgggcatggaggaaggcatcctgccc
cacaagcgctccctggaagcaggcgaagactcgatcgacgaagaacgccggctggcctac
gtgggcgtgacccgggcgcaggacgacctgacgctgacgctcgccctgtctcgccggaag
tggggcaagccgcgcgacagcatccccagcaggttcctgtacgagatgaccggccaggcc
gacaacccgcgctacgccgaggtcaaatcgggccgagccgccaaggccgccgcgcggggg
caaggccgccggtga
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