Pirellulimonas nuda: Pla175_46930
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Entry
Pla175_46930 CDS
T06953
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
pnd
Pirellulimonas nuda
Pathway
pnd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pla175_46930
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Big_13
Phage_BR0599
Planc_extracel
FG-GAP_3
Dockerin_1
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
QDU91272
UniProt:
A0A518DIL5
LinkDB
All DBs
Position
5962723..5967534
Genome browser
AA seq
1603 aa
AA seq
DB search
MSAKSRRGWFGRSRSLDQKLEAGRSRRLRHEPLEDRRMLAILIGGGLAGGGDDLESLNGV
APPSGQTIGSDEFVTITNFRVNDADPIDTFRYTAPATGKLIFGANTGSALANLAVAALDS
AGNSLTGGLLAPGNTVTFPVVAGRQYFFQAMDILPANGEGSQYGLTIQTVAAPVPASVTL
SPASDTGASNSDGVTSLTTPTFFIQDDLATFLANSGSNANVGPIDPAVGAAGYDVQLVAT
NLATGVQALVNAARVPGSAVWTATTPALTPGTYLVAAQTLVTDTFVAAPGRITATGQLST
PIFVTILPVPNAGVGTIDLLASSDTGVFNNDNVTSTPTPAFTGVGPANDRVRVFAQATNA
AGAAVGAPLLVATGVVGSDNTDGTPGDGQGQWQLTTIPIANGLWLFTADFEDAAGTLSAM
TPVPGLGVEIDTVAPGLPLLDLTVASDTGRSNTDNITNVTTPVVTLTTFDPPIPATSRLF
TDNLRYLVYDRVGTAAEVLLYDSSLDPAVEPTTAPGDIFTSLNFVTTTLPVLAAGDHNLR
LEVVDRAGNISQSFLLPTTIDTAAPPISFGLVNTPALPTTLTDGLFDGSDTGVPTNGASY
SDRITSDTTPTLWGQAEANAIVSVWLDANGDGIIQTTGATRDIFLGQTTALPLDGNLANP
VGYWQVSSAIDLNDLTTINSTGGAFVRDGARPLLVTAQDVAGNPVPAGATGAIGVPAFVA
GTTIDALTIFLDTQGPQITAVSANMLPALQGGYDLFDPKPSVNGPTPLVNSITIDFADLP
PRVDNAGTANDFLSPALDAAIAATIGNYTVVGDHVGPVVITAAAVNQAIKVSGTVTAPAG
NTTTFTAAGFVGAAAANRPAVGDFIVFNNGANTIATRLISNYNVATGAITVDNPYGAAPA
IGDGFSIITAASMLHAASIRIFNPPGPLSAVRTAAGANTTTSFGVFASQPGGGSIQVPQV
GDYVRFNTGANAGQIRRVTNNPGFDATMTVATAFPFVPNIGDSFTVIAGNLAANINTASV
TLTFASALPDDRFTITVSDNLTDSGGNKLDGESNAAQPTDNPVLPSGDGVPGGAFVGRFT
IDSRPEIGSYVSQNIAIDINGNGVWDPAAPLGGDASNVDLSFTMDAYISATTPLPGNQSP
HELLVAGKFTPLAGVTPGTGLFDQLATYGQYNGQWLWLIDLDSDGAVYDDYNPVTLTSTA
ANVDPDGADDLIVNQGLFPGFSATARAGALPVAGNFDGNLANGDEIGLYYQGAWFVDTTH
NYVLDTVFSTGLLGAPIVGDFDGDGLDDLAVFNSNVFSFNFRNDGFADATDATLIWGLPG
VLDQPVAADMNGDGVDDIGLWVPRNSAATAPRVTEWYFLVSTTGAPGAGSLAALNHPFSP
PPFGTDLYYEFGDDRALPIVGNFDPPIAAGAVQQQFAEMPGDYDGSGLVDEADRLMWRQY
FGTTNPQADGNGDGVVDLSDYTVWRDHLGMSAPLLAGPASAVSAAFEVPGMVADLAAGPG
VAGSGVAAPSLAEASTPTPLFWVTPTGRTTGGTTGGTAVIDEAIAGAFSDSDDALLLALA
TAQPERLDSGYSAVHTAYDGYGDSDDESEEALALAGGAVGAWE
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaaatctcgccgtggctggtttggccgttctcgttcgttggaccaaaaacta
gaagcgggacgcagccgaaggctgcggcacgagccgctggaagaccggcggatgctggcg
atcttgatcggcggcgggctggccggcgggggcgacgaccttgagagcctaaacggcgtg
gcgcccccaagtggccaaaccatcggctcggacgagtttgtgacgatcaccaacttccgc
gtcaacgacgcggacccgatcgatacgttcaggtacacagcgcccgccaccggcaagctg
atcttcggggcgaacacggggtccgctttagcgaacctcgccgtggcggccctcgacagc
gccgggaactcgctgacgggtggcctgctggcgcccgggaacaccgtcacctttcccgtc
gttgccggtcgccagtatttctttcaggcgatggacattctgccggccaacggggagggt
tcgcagtacggactgacgatccaaacagtcgccgcccccgtcccggccagcgtgacgctg
tcgcccgcttcggacaccggcgcctcgaacagcgacggcgtcacctcgctcacaacgccg
acattcttcattcaagacgacttggcgacgttcctggcgaactcgggatccaacgccaac
gtcgggccaatcgacccggccgtcggcgccgccggctacgacgtgcagttggtcgccacc
aacttggctacgggcgtccaggcattggtcaacgccgcccgcgtgccgggaagcgccgta
tggaccgcgacgacgccggcgctgacgccggggacgtacctggtggccgcgcaaacgctg
gtaacagacacgttcgttgctgcccccggtcgtattacggccactggacagctctcaacg
ccgatcttcgtaacgatcctccccgtccccaacgccggcgtcggcacgatcgacctgctg
gccagcagcgacaccggcgtcttcaacaacgacaacgtcacctcgacccccacgccggcc
ttcaccggcgtcgggccggcaaacgatcgggtgcgggtctttgcccaggccaccaatgct
gccggagcggccgttggggcgccgctgctggtcgcaaccggcgtcgtggggagcgacaac
acagacgggaccccaggcgacggtcaggggcagtggcagctcaccactatccccatcgcc
aacgggctctggctgttcaccgccgatttcgaggacgccgcggggacgctcagcgcgatg
acccccgtgccggggctcggggtcgagatcgacacagtggcgcccggcctgccgctgcta
gacctaaccgtcgcgtccgacactggccgcagcaacacagacaacatcaccaatgtcacc
acgcccgtcgtgacgctcacgacgttcgacccgccgatcccggccaccagccggctgttt
acggacaacctgcgctacctggtgtacgaccgcgtcgggaccgcggccgaggtgctgctg
tacgactcttcgctcgaccccgccgttgagccgaccacggcgcccggcgatatcttcacg
tcgctcaactttgtcaccaccacgctgccggtgctcgccgctggggaccacaaccttagg
ctcgaagtggtagaccgcgcgggcaacatcagccagtcgttcctgctgccgacgaccatc
gacaccgcggcgccgccgatcagcttcggtctggtcaacacgcccgcactgccgaccacg
ctcaccgacggcctgttcgacggcagcgacaccggcgtgccgaccaacggcgccagctac
tccgaccgcatcaccagcgacacgacccccaccctctggggtcaggccgaggcgaacgcg
atcgtctcggtgtggctcgacgcgaacggcgacggcatcatccagaccacgggcgccacg
cgcgacatcttcctcggtcaaaccaccgcgttgccgctggacggcaatctggccaacccg
gtcggctattggcaggtctcctcggcgatcgacctgaacgacctgacgacgatcaactcc
accggcggcgcgttcgtccgcgacggcgcacggccgctgcttgtcaccgcgcaagacgtc
gccggcaacccagtcccggccggcgcgacgggcgccatcggggtgccggcgttcgttgcg
gggacaaccatcgacgcgctgacgatcttcctcgacacgcaggggccgcagatcacggcc
gtatcggccaacatgctgccggccctgcagggcggatacgacctcttcgacccaaagccg
tcggtcaacggcccgacgccgctcgtgaatagcatcacgatcgacttcgccgacctgcct
ccgcgggtcgacaacgccggcacggccaacgacttcctctccccggcgctggacgccgcg
atcgccgcaaccattggcaactatacggttgtgggcgaccacgtagggccggtggtcatc
acagcggccgccgtaaaccaggccatcaaggtctccggaacggtcaccgcaccggccggg
aacaccaccacgttcacggccgcaggcttcgtgggcgccgcggctgcaaaccgcccggcg
gtgggcgatttcattgtgttcaacaacggcgccaacacgatcgcgacccgccttatctcc
aactacaacgtcgccacaggcgccatcacggtcgataacccatacggcgcggccccggcg
atcggcgacggcttctcgatcatcaccgcggcgagcatgctccacgccgcctcgatccgc
atcttcaacccgccggggcccctgtcggccgttcggaccgccgccggcgccaacacgacc
acctcttttggcgtcttcgcgtcccagcctgggggcggtagcatccaagtcccacaagtc
ggcgactacgtccgcttcaacaccggagcgaacgccggccagatccgacgtgtgacgaac
aacccgggtttcgatgcaaccatgacggtcgccacggcgttccccttcgttccgaacatc
ggcgactccttcacggtcatcgccggcaaccttgcggcgaacatcaacacggccagcgta
acgctgacgttcgcctcggcgctgccggacgaccgctttacgatcacggtgagcgacaac
ctcaccgactccgggggcaataagctagacggcgagtcgaatgcggcgcagccgaccgac
aacccggtcctcccctccggcgacggcgtacccggcggggcgttcgtgggccggttcacc
atcgatagccgcccagagatcggcagctacgtctcgcagaacatcgccatcgacatcaac
ggcaacggcgtgtgggaccccgccgcgccgctcggcggagacgcctcgaacgtcgacctg
tcgttcacgatggacgcctacatcagcgcgacgacgccgctgcccggcaatcagagtccc
cacgagctgctggtcgccggcaagttcacgccgctggccggcgtgacgcccggcaccggg
ctgttcgaccagctcgccacttacggtcagtacaacgggcagtggctgtggttgatcgac
ctcgacagcgacggagcggtctacgacgactacaaccccgtcacgctgacgagcacggcc
gccaacgtcgatccggacggcgccgacgacctgatcgtcaatcaaggactcttccctgga
ttctccgccacggcccgcgcgggggccctgccggtagcggggaacttcgacggcaacctc
gccaacggcgacgagatcggcctgtactatcagggcgcgtggttcgtggacaccacgcac
aactacgtgctcgacacggtctttagcaccgggctcttgggggcgccgatcgtcggcgac
ttcgacggcgacgggctcgacgacctcgccgtgttcaacagcaacgtcttctcgtttaac
ttccgcaacgacggcttcgccgacgccaccgacgccacgctcatctggggcctgcccgga
gtgctcgaccagccggtcgccgcggacatgaacggcgacggcgtcgatgacatcggtctg
tgggtcccgcgcaactcggccgccacggcgccgcgcgtgaccgagtggtacttcttggtg
tcgaccacgggcgcccccggcgccggcagcctcgcggcgctcaaccacccgttctcgccg
ccgccgttcgggaccgacctctactacgagttcggcgacgacagggcgctgccgatcgtc
ggcaacttcgacccgccgatcgccgcgggcgccgtgcagcagcagttcgccgagatgccg
ggcgactacgacggcagcggcttggtcgatgaagcggaccggctgatgtggcgccagtac
ttcggcaccaccaacccgcaagccgatggcaacggcgacggcgttgtcgacctgtccgac
tacaccgtgtggcgcgaccacttggggatgtcggccccgctgctggcgggccccgcctcg
gcggtttccgcggcgtttgaggtcccaggcatggtcgcggacctcgcggccggcccgggc
gttgcgggatcgggcgttgcggcgccaagcctggcagaagccagcacgccgacgcccctg
ttctgggtgaccccgacaggcaggacgacgggcgggacgacgggcgggaccgcggtgatc
gacgaggccatcgccggcgccttcagcgactccgacgacgccctgctgttggccctcgcc
acggcccagccagagcggctggacagcggttactcggctgtccacacggcttacgacggg
tacggcgactccgacgacgagtcggaggaagccctggcgctggccgggggcgccgtcggc
gcctgggagtaa
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