Pirellulimonas nuda: Pla175_48900
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Entry
Pla175_48900 CDS
T06953
Symbol
yfhQ
Name
(GenBank) putative A/G-specific adenine glycosylase YfhQ
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
pnd
Pirellulimonas nuda
Pathway
pnd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pla175_48900 (yfhQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnd03400
]
Pla175_48900 (yfhQ)
Enzymes [BR:
pnd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Pla175_48900 (yfhQ)
DNA repair and recombination proteins [BR:
pnd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pla175_48900 (yfhQ)
Prokaryotic type
Pla175_48900 (yfhQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
HHH_5
EndIII_4Fe-2S
Cdd1
Motif
Other DBs
NCBI-ProteinID:
QDU91461
UniProt:
A0A518DIZ8
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All DBs
Position
6198260..6199324
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AA seq
354 aa
AA seq
DB search
MDFASLRRRLLGWYAKHARDLPWRQSRDPYRVWLSEVMLQQTQVETVRPYFERFVAAWPT
VADLAAAQEQHVLRQWEGLGYYRRARNLHAAAKRVVDEHGGEFPRDVAGLTTLPGVGRYT
AGAIASIAYDAPAPIVEANTARLYARLTGLREPVASTAGQRALWAFAEQVVPRRGAGRLN
QALMELGALVCTPESPKCDACPIATHCAAFAQQATRVIPVAAKRQTITEVREAAVVVRRG
ADVLLRQCGPGERWAGLWDFPRFPVEAEGPLFATRELVAGVERLTGVVCDSPRHHDTLRH
AVTRFRIRLDCYHATRLGGRVRSTQESPVKWVTVAGLAEAPLSVTGRKIAAGLR
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgcatcactacgccggcggctcctgggctggtacgccaagcacgcccgcgat
ctcccctggcgtcagagccgcgacccgtaccgcgtttggctcagcgaggtgatgcttcag
cagacgcaggtagaaaccgtgcggccctacttcgagcggttcgtggccgcctggccgacg
gtcgccgacctggccgcggcccaggagcagcacgtgctccgccaatgggaggggctcggc
tactaccgccgggcgaggaacctgcacgcggcggccaagcgggtggtcgacgagcacggc
ggcgagtttccccgcgatgtcgccggcctgacgaccctgcctggcgtcgggcgatacacg
gccggggcgattgcttcgatcgcctacgacgccccggcgccgatcgtcgaagccaacacc
gcccggctctacgcgcggctgaccggtctgcgggagcccgtcgccagcacggcggggcaa
cgcgcgctatgggcgtttgctgaacaggtggttccgcgacgcggcgccggccgtctgaac
caagcgttgatggaactgggcgccctggtctgtacgcccgagtcgcccaagtgcgacgcc
tgcccgatcgcgacgcactgcgccgcattcgcccagcaggcgacgcgcgtgatacccgtt
gcggcgaagcggcagaccatcaccgaagtccgcgaggcggccgtggtggtgcggcgcggc
gccgacgtgctgctgcgccaatgcgggccgggcgagcgatgggcggggctgtgggacttc
ccgcgattcccggtggaggccgaagggcccctgttcgcgacgcgcgagctggtcgccggc
gttgagcggctcaccggcgtcgtgtgcgactcgccgagacaccacgacacgctgcggcac
gcggtgacgcggttccgaatccggctcgattgctaccacgctacgcggcttggcgggcgg
gtgcgttcgacgcaggagtcgccggtgaagtgggtgaccgtcgcggggctggcggaggcg
ccgctgtcggtgactgggcggaagatcgcagcggggttgcgttga
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