Pirellulimonas nuda: Pla175_48920
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Entry
Pla175_48920 CDS
T06953
Symbol
rhlE_3
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
pnd
Pirellulimonas nuda
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
Pla175_48920 (rhlE_3)
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GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
WHD_HRQ1
ResIII
Motif
Other DBs
NCBI-ProteinID:
QDU91463
UniProt:
A0A518DJ10
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Position
6200449..6202905
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AA seq
818 aa
AA seq
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MDVAALIKRIENRRDYAGQIEWLEELPSREGRFAEPASPLPESIQRLLAARGAQRLYVHQ
VDALEAARDGRDLVVITGTASGKTLCYNLPILEASLQGPDARSLCLFPTKALAQDQLKGL
LELVSGDPQVAAAVRPGVYDGDTPTAQRRRIRNEANVVLSNPDMLHAAILPYHPKWSTFF
AELKYVVIDEVHTYRGILGAHASAVLRRLMRVCEHYGSRPTFLAASATIANPGELTSRLI
GRDVTVIDDDGSPRGKKHFVLWNPTPLGVDSLARRSASDDAVTWLIEAMHAGGQALAFTR
TRQAAELIQRYAREQLERDHSPLATQVRAYRGGYLPNERRQIEDDLFAGRLRGIASTNAL
ELGIDIGSLDAAILVGYPGTIASTWQQAGRSGRRQDDSLAVLVAGNEPVDQYLLRNPRYF
FAQTPEHAVVDPDNPYVLAKHLKAAAFELPLTPADLDRFGPLAPPIAGALHDEAQLALVG
DAYYCPGGQNPTVGVSLRHMSDNTFSIVCKTAQNAGRDLYASGAPSRIRDGFEVIANVDS
ISAPELVYPEAVYLHAGETFLVRELDLEGKVAYVERRETDYYTQAVLESNVLVTGPRAQG
DAVRCAQLGYGDVDVSWQTVAFKKIKFNTKENIGLGPVDIPAQNLATTAVWLVPDDTVRA
AMKDEGLRNSEGCCGLRNLAVVALPLVAMCDSRDLGGVVDSKNLGRSTVILYDRYPGGLG
YCEKGFQRITELLAICLDMVRDCPCPDGCPSCVGLPNLRPAIHSDPDLTRGHPIPNKHAT
RRLLELLTGDGVDHQAAESVVEEKESPNSLHESPQTSG
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcgccgcgctcatcaagcggattgagaatcgccgcgactacgcggggcagatc
gagtggctcgaggaactcccgtcgcgtgaagggcggttcgccgagccggccagcccgctc
ccggagtcgatccagcggctgctagcggcgcggggcgcccagcggctctatgtccaccaa
gtcgacgcccttgaggcggcgcgtgacgggcgcgacttggtagtcatcaccggcactgct
agcggcaagacgctgtgctacaacctgccgatcctggaagcgtcgctccagggccccgac
gctcgttcgctctgcctcttcccaactaaagcgctcgctcaagaccagctcaaggggctt
ctcgagctggtctcgggcgacccccaagtcgcagccgcggtgcggcccggcgtgtacgac
ggcgacacccccacggcccagcggcgccggatccgcaacgaggcgaacgtcgtcctctcg
aacccagacatgctgcacgcagcgatcctcccgtaccatcccaagtggtcaacgttcttc
gccgagctgaagtacgtggtgatcgacgaggtgcacacctaccgtggcatcttgggcgcc
cacgcgtcggccgtgctccggcgcctgatgcgcgtctgcgagcactacgggtcgcggccc
actttcctggcggccagcgccaccatcgccaacccgggcgagctgaccagccggctgatt
gggcgcgacgtgacggtgatcgacgacgacggttccccccgcggcaagaagcacttcgtg
ctctggaaccccacgcctctgggggtcgattcgctggcacgccgcagcgccagcgacgac
gcggtgacgtggttgatcgaggcgatgcacgccggcgggcaagcactggccttcacccgc
acccgccaagcggcggagctgatccaacgctacgcgcgtgaacagttggagcgagaccac
tcgccgctggcgacgcaggtgcgcgcctaccggggtgggtacctgccgaacgaacgccgg
cagatcgaggacgacctgttcgccgggcggctgcgcgggatcgcctcgaccaacgcgcta
gagctggggatcgacatcggatcgctcgacgcggcgatcttggtgggctaccccggcaca
atcgccagcacctggcagcaagcgggccgcagcggccggcggcaggacgacagcctggcc
gtgctggtggcggggaacgagccggtcgaccagtacctgctgcgcaacccgcgttacttc
ttcgcccagaccccggagcacgcggtcgtcgaccccgacaacccctacgtgctggccaag
cacctcaaggccgcggcgttcgagctccccctgacgcccgccgacctcgaccgcttcggc
cccctggcgccgccgatcgccggcgcgctgcacgacgaggcgcagctcgccctggtagga
gacgcctactactgcccgggcgggcagaacccgaccgtcggcgtgtcgctccggcacatg
agcgacaacacgttcagcatcgtctgcaagacggcgcagaacgccgggcgcgacctgtac
gcctccggagcgccgtcgcgcatccgcgacggctttgaggtaatcgcaaacgtcgattcg
atcagcgctccggaactggtctaccccgaggcggtgtacctgcacgcgggcgaaaccttc
ttggtccgcgagctcgacctcgaggggaaggtggcctacgtcgagcgacgcgagaccgac
tactacacgcaggccgtgcttgagagcaacgtgctggtcaccggcccacgggcgcaggga
gacgcggtgcgatgcgcgcagctcggctacggcgatgtcgacgtgagctggcagaccgtc
gccttcaagaagatcaagttcaacaccaaggagaacatcggcctgggcccggtcgacatc
ccggcgcagaacttggcgaccaccgccgtatggctagtgccggacgacacggtgcgggcc
gccatgaaagacgagggcctgcgcaacagcgagggctgttgcgggctgcgcaacctggcc
gtggtggcgctgccgctggtggcgatgtgcgacagccgagacctgggcggggtggtcgac
agcaagaacctgggccgctcaaccgtgatcctgtacgaccgctacccgggtgggttgggc
tactgcgagaagggtttccagcgcatcaccgagctgctggcgatctgcctcgacatggtg
cgcgattgcccctgtcccgacggctgccccagttgcgtgggactccccaacctgcggccg
gcgatccacagcgaccccgacctgacccgcgggcaccccatcccgaacaaacacgccacc
cggcggctgctagagctgctcaccggcgacggagtagatcaccaagccgcagagagcgtc
gtagaagaaaaagagtcgcccaacagcttgcacgaatcgccgcaaaccagtggttga
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