Pirellulimonas nuda: Pla175_49070
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Entry
Pla175_49070 CDS
T06953
Symbol
sigA_5
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
pnd
Pirellulimonas nuda
Pathway
pnd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Pla175_49070 (sigA_5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnd03021
]
Pla175_49070 (sigA_5)
Transcription machinery [BR:
pnd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pla175_49070 (sigA_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
KORA
DUF6819
Motif
Other DBs
NCBI-ProteinID:
QDU91478
UniProt:
A0A518DJ39
LinkDB
All DBs
Position
6226675..6227550
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AA seq
291 aa
AA seq
DB search
MPAAPKPKKKRASSAVQTPLETYLREINETALLTAADERELATKIGEGDIHARDRMVRAN
LRLVVNIARGYAGKGLGLQDLIEEGNLGLLRAVEGFDPAMGTRFSTYASYWIKQSIKRAL
INTGKTIRIPAYMVELLSKWRRATARLTEELDRSPTPEEIARVLGLPKKKLPIIKKAIKI
YNATPQTDQADSGWTLGDMVMDEGQLSPDEAMLESDSMTHALAMLDDMDEREATILRLRF
GLTGGEPKTLKEIGLELGLTRERVRQIETEALGKMAISLEDPAAAERMRMR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgctccgaagcccaagaagaaacgcgccagctccgccgtgcaaacgccgctg
gagacctacctgcgcgagatcaacgagaccgcgctgctgaccgccgcggacgaacgcgag
ctggccaccaagatcggcgagggcgacatccacgcccgcgaccgcatggtgcgggccaac
ctccgcctggtggtgaacatcgcccgcggctacgccggcaaggggctggggctgcaggac
ctgatcgaggaagggaacctggggctgctgcgcgccgttgaggggttcgacccggccatg
gggacccgcttcagcacctacgccagctactggatcaagcagtcgatcaagcgtgccctg
atcaacaccggcaagaccatccgcatcccggcctacatggtcgagctgctgagcaagtgg
cggcgggccaccgcgcggctgaccgaagagctggaccgcagccccaccccggaagagatc
gcccgcgtgctgggcctgcccaagaagaagctgccgatcatcaagaaggcgatcaagatc
tacaacgccacgccgcagaccgaccaggccgactccggctggacgctgggcgacatggtg
atggacgagggccagctcagccccgacgaggcgatgctcgagagcgacagcatgacccac
gcgctggcgatgctggacgacatggacgaacgcgaggcgaccatcctccgcctccgcttc
ggcctgaccggcggcgagcccaagacgctcaaagagatcggcctagagctgggcctgacc
cgcgaacgcgtgcggcagatcgagaccgaagcgctcggcaagatggcgatcagcctggaa
gaccccgcggccgcggagcggatgcggatgcggtaa
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