Pirellulimonas nuda: Pla175_50240
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Entry
Pla175_50240 CDS
T06953
Symbol
fadB
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pnd
Pirellulimonas nuda
Pathway
pnd00071
Fatty acid degradation
pnd00280
Valine, leucine and isoleucine degradation
pnd00310
Lysine degradation
pnd00362
Benzoate degradation
pnd00380
Tryptophan metabolism
pnd00410
beta-Alanine metabolism
pnd00640
Propanoate metabolism
pnd00650
Butanoate metabolism
pnd00907
Pinene, camphor and geraniol degradation
pnd00930
Caprolactam degradation
pnd01100
Metabolic pathways
pnd01110
Biosynthesis of secondary metabolites
pnd01120
Microbial metabolism in diverse environments
pnd01200
Carbon metabolism
pnd01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
pnd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Pla175_50240 (fadB)
00650 Butanoate metabolism
Pla175_50240 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
Pla175_50240 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Pla175_50240 (fadB)
00310 Lysine degradation
Pla175_50240 (fadB)
00380 Tryptophan metabolism
Pla175_50240 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Pla175_50240 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Pla175_50240 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Pla175_50240 (fadB)
00930 Caprolactam degradation
Pla175_50240 (fadB)
Enzymes [BR:
pnd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Pla175_50240 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Pla175_50240 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Pla175_50240 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
Pla175_50240 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
F420_oxidored
AlaDh_PNT_C
RS_preATP-grasp-like
GIDA
Motif
Other DBs
NCBI-ProteinID:
QDU91594
UniProt:
A0A518DJD1
LinkDB
All DBs
Position
6380258..6382387
Genome browser
AA seq
709 aa
AA seq
DB search
MASAQHTRLEFDGPVALLTLDHAQRSANLLSSDVLDEIEAHLDTLAGRDGVQGLVFLSAK
PGVFIAGADLAEFAAGLDRPKDQIVGVSRRGQTLFARLAEAPYVSVAAIDGVCVGGGAEL
AVWCDRRLMTASSKSQFGFPEVKLGLFPGWGGTARTPRMVGLGGAVELVTGGESIGAAEA
YKLGLVSAVVTGDLLAAAKRLIEAEQESGQYLADRQRWAGPVAMDEAERGFLGVTAGAYI
QQQTGGHYPAPLAALELMLEAAPLPLDEALKLEAESFAPLFGSKENRALLNVFFLQDRAK
KTPPAPSPQPPAPARVSVLGAGVMGQGIAAAHARRGIPVLLADSRPEALANGIAGVVGEA
SYDKALGGPSAARAIEMAALVGPGLSDEALAESDIVIEAIYEDLRAKRELLGRLAPLAAD
DALLCSNTSTIPITQLAQGLPHPERFCGLHFFNPVRKMPLVEVIRGAETSDATVAQAAAH
ARRIGKTPVVVADGPGFLVNRLLLPYMNEAALMAEEGVPIRKIEGAAKRFGMPMGPLTLF
DVVGLDVATHAGGVMAAAFPDRMQAASIVPRLVEADRLGQKNGRGFFDYPSSKPGKTPRG
EPSAEVDAMLEVDSPVDVAELPYDLADRLLLPMLLEATRAIEDGIVADVRDVDLALILGI
GFPPHKGGLFFWADQVGADAILQRLETLTPLGSRFEPTAMLQETKRFYE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcccaacacacccgcctcgagttcgatggccccgtcgccctgctgacgctc
gaccacgcccagcggagcgccaacctgctctcctccgacgtgctcgacgagatcgaggcg
cacctcgacacgctcgccggccgcgacggcgtccaggggctggtcttccttagcgccaag
ccgggggtgtttatcgccggcgccgacctggccgagtttgcggcggggctcgaccgcccc
aaggaccagatcgtcggcgtctcccgccgcgggcagacgctgtttgctcggctggccgag
gcgccctacgtgtcggtcgccgcgatcgacggcgtgtgcgtcggcggcggggccgagctg
gccgtgtggtgcgaccgccggctaatgaccgccagcagcaagtcgcagttcggcttcccc
gaggtcaagctggggctgttccccggctgggggggcaccgcccgcacgccgaggatggtc
ggcctggggggcgcggtcgagctggtcaccggcggcgagtcgatcggcgcggccgaggcg
tacaagctcggcctcgtgagcgccgtcgtgaccggcgacctgctggccgccgccaagcgg
ctgatcgaggccgaacaggagagcggccagtacctggcggaccgccagcggtgggccggc
cccgtggcgatggacgaggcggagcgcggcttcctgggggtcaccgccggcgcctacatc
cagcaacaaaccggcggccactacccggcgcccctggccgcgctcgagctaatgctcgag
gccgcgccgctgccgctggacgaggcgctcaagctggaagccgaaagcttcgcgccgctg
ttcggctcgaaagagaaccgcgcgctgctcaacgtcttcttcctgcaagaccgcgccaaa
aaaactcccccagcccccagcccccaacccccggcccccgcacgcgtcagcgtgctgggc
gcgggcgtgatggggcaaggcatcgcggcggcccacgcgcgacgcggcatcccggtgctg
ctggccgacagccggcccgaggcgctcgccaatgggatcgccggcgtggtgggcgaggcg
tcgtacgacaaggccttggggggcccgagcgccgcgcgggcgatcgagatggccgcgctg
gtcggcccggggctctccgacgaggcgctggccgagtcggacatcgtcatcgaagcgatc
tacgaagacctgcgggccaaacgcgagctgctcggccggctggcgccgctggccgcggac
gacgcgctgctgtgctcgaacacctcaaccatccccatcacccagctcgcccaggggctg
ccccaccccgagcggttctgcgggctgcacttcttcaaccccgtgcggaagatgccgctg
gtagaggtgatccgcggcgccgagaccagcgacgcgaccgtggcccaagcggccgcccac
gcgcggcggatcggcaagacgccggtggtggtggcggacgggcccggcttcttggtgaac
cggctgctgctgccctacatgaacgaagcggcgttgatggccgaagaaggggtcccgatc
cgcaagatcgagggcgccgccaagcggttcggcatgccgatgggcccgctgacgctgttc
gacgtggtggggctcgacgtcgctacccacgccgggggcgtgatggcggccgcgttcccc
gaccgcatgcaagcggcgtccatcgtcccccggctggtcgaggcagaccgcttgggtcag
aagaacggccgcgggttcttcgactacccgtcgtcgaagcccggcaagacgccccgcggc
gagccgagcgccgaagtcgacgcgatgctggaagtcgactcccctgtcgatgtggcagag
ctgccgtacgacttggccgaccggctgctgctgccgatgctgctagaagcgacgcgcgcg
atcgaagacggcatcgtggccgacgtgcgcgacgtcgacctggcgctaatcctggggatc
ggcttcccgccgcacaaaggggggctgttcttctgggccgaccaggtgggcgccgacgcg
atcctgcagcggctcgaaacgctcaccccgctcgggagccgcttcgagccgacggcgatg
ctccaagaaacgaagaggttctacgaatag
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