Polynucleobacter necessarius: Pnec_0083
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Entry
Pnec_0083 CDS
T00683
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pne
Polynucleobacter necessarius
Pathway
pne00300
Lysine biosynthesis
pne00470
D-Amino acid metabolism
pne01100
Metabolic pathways
pne01110
Biosynthesis of secondary metabolites
pne01120
Microbial metabolism in diverse environments
pne01230
Biosynthesis of amino acids
Module
pne_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pne00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pnec_0083
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pnec_0083
Enzymes [BR:
pne01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Pnec_0083
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ACB43411
UniProt:
B1XST4
LinkDB
All DBs
Position
complement(76539..77837)
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AA seq
432 aa
AA seq
DB search
MTSKAIPLPKLSGFTERNGNWYAEEVPLTDLAKEFGTPLYVYSKKALTEAYQAYDKACVD
ANGKRRARVHYAMKANSNLAVIDCFKKLSSGFDLVSGGELARALAIGADPKSLVFAGVGK
SAAEIAAALKAGVKCINAESIAELHKINQVATELKLRAPISLRVNPDVDAQTHPYISTGL
KGNKFGIVYHEVLKTYREASLLSQIDVVGIDCHIGSQITTIAPYLDALDKVLDLVAQLKK
EGIAIHHLDLGGGLGISYSDETPPDITEFTNTLLNRVAERGFGHLDVVLEPGRSLVGNAG
VLLTTVEYLKPGAEKNFCIVDASMTELMRPALYEAHHGIVPVKNKPAEALTYDIVGPVCE
SGDWLGRNRHLAVEEGDLLAILSAGAYGFVMASNYNTRPKPAEIMVDGKNIYIIRARENT
ADLFSSEKTLPN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtaaagcaattcctcttcctaagttatccggatttaccgaacgcaatggcaat
tggtatgccgaagaagttccgctcactgatttagcaaaagagttcggcacaccgctctac
gtctatagcaagaaagcattaactgaagcgtatcaggcttacgataaggcatgtgttgat
gccaatggcaagcgtcgtgctcgtgtgcactatgcgatgaaagccaatagcaatttagcg
gtgattgattgctttaaaaaactaagctctgggtttgatttagttagcgggggagaattg
gctcgcgcattagctattggcgcagatcctaaaagccttgtatttgctggcgttggcaag
tctgctgccgagatagctgccgccttgaaagcgggtgtcaaatgcatcaatgctgaatca
atcgccgagctacacaagattaatcaggttgcaaccgaactaaaactgcgcgccccaatt
tctttacgcgtaaatcctgatgtcgatgcgcaaactcatccttacatttctactggatta
aagggcaacaaatttggcattgtctatcacgaggttttaaaaacctaccgtgaagcttcg
ctgctctcccaaattgatgttgttggtattgattgccatatcggttcacaaattactact
atcgctccttacctagatgcactcgataaagttttagatctagtagctcaactgaaaaaa
gaaggtattgccattcatcacttggacttgggtggtggcctcggaatttcatatagcgat
gaaactccaccggatatcaccgaatttacgaacaccttattaaatcgagttgctgaacgt
ggcttcggtcatctagatgttgttcttgaaccaggtagatctttagttggcaatgctggc
gtactattaaccaccgtggaatatctaaagccaggcgccgaaaagaacttctgcattgtc
gatgcctccatgacagaactaatgcgcccagccttgtatgaagcacatcacggcattgtg
ccagtaaaaaacaagccggcagaagccttaacttatgacattgttggccccgtttgcgag
tctggtgactggctaggcagaaatcgtcacttagcggttgaagagggcgatctgcttgcc
atcttatccgctggtgcctatggttttgtgatggcctctaactacaacacgcgccctaaa
cctgctgagattatggttgatggcaaaaatatttacatcatccgtgcgcgtgaaaatacc
gctgacttattttcctctgagaaaactttaccaaactaa
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