Polynucleobacter necessarius: Pnec_0151
Help
Entry
Pnec_0151 CDS
T00683
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pne
Polynucleobacter necessarius
Pathway
pne03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pnec_0151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pne03400
]
Pnec_0151
Enzymes [BR:
pne01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Pnec_0151
DNA repair and recombination proteins [BR:
pne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pnec_0151
Prokaryotic type
Pnec_0151
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACB43460
LinkDB
All DBs
Position
complement(132333..133106)
Genome browser
AA seq
257 aa
AA seq
DB search
MKALFSKEDIPDDWRELLGNYLESNGWQSLEKNLQAILDLDASVVRPEPRHFFKALKLTP
VNSVKAVILGQDPYHSPGLAQGLAFSIPAEIAVNSREFPSSLRNISKALALEGFGQLPNG
DLHNWANQGVLLLNTALSVKSALSVKLGGAGSHANLGWKSLIDHLISALSMAKPHLVWML
WGGYAQSKLPLIESGQDQLVLQSSHPSGLGVYKTDKPFLMPGGKASCNHFTKTNQWLADH
QIPAIQWVDRLQTDLFD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagcgctattttcaaaagaggatatccctgatgattggcgagaattactcggaaac
tacctcgagtcgaatggctggcaatccttagaaaagaatttgcaagctattttggatctg
gatgctagtgttgtgaggcctgagcctcggcacttttttaaagccctcaaactcactcca
gtcaattcagtaaaggcagtcattctgggacaagacccctaccactccccgggactagcg
caaggactcgctttttctattcctgccgagattgcagtgaactcgcgagaatttcccagc
tcgcttcgcaatatcagcaaagcgcttgctctagagggttttggtcaattgcccaatggc
gatttacacaactgggcaaatcaaggagtgctacttctcaataccgccttgagcgtcaaa
tccgccttgagcgtcaaattgggtggggcgggaagtcatgccaatttaggctggaaaagt
ttgattgatcatttaatcagcgcactctccatggctaagccgcatttagtctggatgctc
tggggtggttatgcccaatccaagttgccgctcattgaaagtggtcaagatcaattggtt
ttgcagtcctcccacccctctggcttgggtgtatacaaaacagacaaaccttttttaatg
ccaggcggcaaagctagttgtaaccactttaccaagactaatcaatggctggcagatcat
caaatcccagctattcaatgggtagatagattgcaaacggatttatttgactaa
DBGET
integrated database retrieval system
