Polynucleobacter necessarius: Pnec_0217
Help
Entry
Pnec_0217 CDS
T00683
Name
(GenBank) NUDIX hydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pne
Polynucleobacter necessarius
Pathway
pne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pnec_0217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pne03019
]
Pnec_0217
Messenger RNA biogenesis [BR:
pne03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Pnec_0217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
ACB43514
UniProt:
B1XT37
LinkDB
All DBs
Position
complement(195853..196446)
Genome browser
AA seq
197 aa
AA seq
DB search
MLDREGYRPNVGIVLLNSRNEVFWGKRVGQHSWQFPQGGIQHGESPEQAMYRELHEEVGL
LPEHVQIIGRTRDWLRYDVPEEYLRRQNSTRVHRAAYRGQKQIWFLLRLVGLDSDIQLRA
FEHPEFDAWRWVPFWIQLDAVIGFKREVYQLALSELARYLSRGMRMQQLAWGTPLDLFQS
FYAGNEDQSKSSEKSDK
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaccgtgaagggtatcgcccgaatgtcggcattgtcctcctcaacagccgtaac
gaggtcttctggggaaaacgcgttgggcagcattcgtggcagttcccacagggtgggatt
cagcatggtgaaagccctgaacaggcgatgtaccgtgaattgcatgaggaggttggctta
ctaccggagcatgtccagattattggacgcaccagggattggcttcgctacgatgtccct
gaggagtacttgcgtcgccaaaactccacccgcgtgcaccgcgccgcttatcgcggacaa
aaacaaatctggtttctcttgcgtctagtaggtctagacagcgacatccaattacgcgcc
ttcgaacatccagaatttgatgcatggcgctgggtgcctttttggattcaacttgatgca
gtaattggctttaaacgtgaagtctatcaattagcgctctcggaactggcgcgttacctt
tctcgaggaatgcgcatgcagcaactggcgtggggtacaccgttagatctattccagtct
ttttacgccgggaatgaagatcaatcaaagtcttcggaaaaatcggataaataa
DBGET
integrated database retrieval system
