Polynucleobacter necessarius: Pnec_0256
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Entry
Pnec_0256 CDS
T00683
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pne
Polynucleobacter necessarius
Pathway
pne03030
DNA replication
pne03430
Mismatch repair
pne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pnec_0256
03430 Mismatch repair
Pnec_0256
03440 Homologous recombination
Pnec_0256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pne03032
]
Pnec_0256
03400 DNA repair and recombination proteins [BR:
pne03400
]
Pnec_0256
Enzymes [BR:
pne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pnec_0256
DNA replication proteins [BR:
pne03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pnec_0256
DNA repair and recombination proteins [BR:
pne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pnec_0256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Glyco_hydro_59_C
Motif
Other DBs
NCBI-ProteinID:
ACB43551
UniProt:
B1XT74
LinkDB
All DBs
Position
235358..236419
Genome browser
AA seq
353 aa
AA seq
DB search
MVKVDALQAHLKSLSAGGSMLPLYVFSGDEPLLMMEAMDQLRAAAKKQNFTEREVLLQER
GFDWSTLLSAGQTMSLFGDKRWVELRIPTGKPGRDGADTLKQFAAQIASQSSGADGPDTV
VCIVLPRLDGKTKTSAWFSALDNAGMAIQIDSLDRSHLPNWIAGRLKRQDQEVEAGPEGQ
RTLEFIADQVEGNLIAAHQEILKLGLLYPVGKLSEEQIRSSILKVARYNVFELTEAMLAG
DLARLNRMLDGLKGEGEPLVLILWSVTEELRILSKLKAASDAGESVQNLMRANRIWGNKE
RLYPAALRRVQPLKLRRAMQVAAGLDRQVKGLHAAELPADPWDGLRLVGNLLR
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagtcgatgccctgcaagcacacctcaagtccctgagtgctggtggatccatg
ttgccactgtatgtttttagtggtgatgagcctttgttgatgatggaggccatggaccaa
ttgagggctgcggccaaaaagcaaaactttactgagcgtgaggtattgctgcaagagcgc
ggctttgattggagtactttattaagtgctggtcagacaatgtctttgtttggggataag
cgttgggtagaactgcgtataccaactggcaagcctgggcgtgatggtgccgacacttta
aaacaatttgctgctcaaattgcttcgcagtcaagtggcgccgatggtccagacacagtg
gtttgcattgtgttgcctcgcttggatggtaagaccaagacttccgcgtggtttagtgcg
cttgataatgccggtatggcgattcagattgattcattggatcgcagtcatttgccgaat
tggattgctggacgacttaagcgtcaagatcaagaagttgaagctggccccgagggtcag
cgcacgcttgaatttattgctgatcaagtagagggtaatttaattgctgctcatcaagaa
attctgaagttgggtttgctttaccccgtcggaaaattaagtgaagaacaaatacgttcc
tcaattttgaaggtggcacgttacaacgttttcgaattaacggaagctatgcttgctggc
gatctcgctaggcttaatcgtatgttagatggccttaaaggtgaaggtgagccgctagta
ttgattctgtggagcgtaaccgaagagcttcggatactatctaaactaaaggcggcaagt
gatgctggggagtctgtgcaaaatctcatgcgtgctaatcggatttggggcaataaagag
cgtttatatccagcggcgttgagaagggttcagccactcaaactccgcagagcgatgcaa
gtggccgcagggttggatcgccaggtaaaaggtttgcatgctgcagagttgccagcagac
ccttgggatggtctgcgtttagttggcaatttactgcgttaa
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