Polynucleobacter necessarius: Pnec_0307
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Entry
Pnec_0307 CDS
T00683
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pne
Polynucleobacter necessarius
Pathway
pne00260
Glycine, serine and threonine metabolism
pne00460
Cyanoamino acid metabolism
pne00630
Glyoxylate and dicarboxylate metabolism
pne00670
One carbon pool by folate
pne00680
Methane metabolism
pne01100
Metabolic pathways
pne01110
Biosynthesis of secondary metabolites
pne01120
Microbial metabolism in diverse environments
pne01200
Carbon metabolism
pne01230
Biosynthesis of amino acids
pne01240
Biosynthesis of cofactors
pne04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pne00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Pnec_0307
09102 Energy metabolism
00680 Methane metabolism
Pnec_0307
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Pnec_0307
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Pnec_0307
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Pnec_0307
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Pnec_0307
Enzymes [BR:
pne01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Pnec_0307
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ACB43600
UniProt:
B1XTC3
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All DBs
Position
275787..277031
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AA seq
414 aa
AA seq
DB search
MFDRQNTLAKTDPQLWEAIQNENKRQEDHIELIASENYTSPAVMAAQGSQLTNKYAEGYP
GKRYYGGCEFIDVAEQLAIDRVKALFGAEAANVQPHCGASANQAVFLAFLKPGDTFMGMS
LAEGGHLTHGMALNMSGKWFNPIAYGLDKNEEIDYEQMERLAREHKPKLIIAGASAYSKK
IDFERIGKLAKEVGAIFMVDMAHYAGLVAAGVYPNPVPHADIVTSTTHKSLRGPRGGIIL
MKAEHEKAINFAVFPGLQGGPLMHVIAAKAVAFKEAAEPGFKDYQKQVVANAKALAETLI
ARGLRIVSGGTDSHVMLVDLRAKSMTGKEAERVLGEAHITCNKNGIPNDPEKPMVTSGIR
LGSPAMTTRGFKEAEARQVGNFIADVLDNPNDPANIAKVRAQVAELTKRFPVYD
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaccgtcaaaacaccttagccaaaaccgatccccagttgtgggaagccattcag
aacgaaaataagcgtcaagaagaccatattgagctgattgcctctgagaactacacctct
ccagcggtgatggcggcccagggctctcagttgaccaataagtatgctgaaggctaccca
ggcaagcgttattacggtggctgtgaattcatagatgtagctgagcaattagcgatcgat
cgtgtcaaagccttgtttggtgctgaagcagcaaacgttcaaccccattgcggcgcgtct
gcaaaccaagctgtatttttagcattcttaaaaccaggcgatacctttatgggtatgagt
ctggctgagggcggtcacttgacccacggtatggctttgaacatgagcggtaagtggttt
aacccaattgcttatggccttgataaaaatgaagagattgattacgagcagatggagcgt
ttagctcgtgaacacaaaccaaaattgattattgctggcgcatctgcttactcaaagaaa
attgattttgagcgcatcggtaaattagcaaaagaagtcggcgccatctttatggtggat
atggctcactacgctggtttggttgctgcaggcgtttatccaaatcctgtgccgcatgct
gacatcgttacctcaactacccacaagagtttgcgcggtcctcgtggcggcattatcttg
atgaaagctgaacacgagaaagccattaactttgcagtgttcccgggcttacagggtggc
cctttgatgcatgtgattgctgctaaagcagtggcatttaaagaagcagctgagccaggt
ttcaaggattatcaaaagcaagtcgttgcaaatgcaaaagcacttgctgagactttgatt
gctcgtggtttgcgcattgtttctggcggtacagattctcatgtgatgttggtggattta
cgtgccaagagcatgactggtaaagaagctgagcgcgtattaggtgaagcgcatatcact
tgcaacaaaaatggtattccgaatgatccagaaaaaccaatggtgactagcggcattcgt
ttgggttcccctgcaatgacaacgcgtggatttaaagaggcggaagcaagacaagtgggt
aactttattgctgacgttttagataatccaaatgatcctgcgaacatcgctaaagtgcgc
gcgcaagttgctgagctcactaagcgtttcccagtttacgattaa
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