Polynucleobacter necessarius: Pnec_0644
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Entry
Pnec_0644 CDS
T00683
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pne
Polynucleobacter necessarius
Pathway
pne03030
DNA replication
pne03430
Mismatch repair
pne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pnec_0644
03430 Mismatch repair
Pnec_0644
03440 Homologous recombination
Pnec_0644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pne03032
]
Pnec_0644
03400 DNA repair and recombination proteins [BR:
pne03400
]
Pnec_0644
Enzymes [BR:
pne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pnec_0644
DNA replication proteins [BR:
pne03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pnec_0644
DNA repair and recombination proteins [BR:
pne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pnec_0644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_14
AAA_22
AAA_5
AAA_30
AAA_24
AAA_18
AAA_19
nSTAND3
TsaE
AAA_2
Mg_chelatase
SKI
Glyco_tranf_2_5
NTPase_1
AAA_assoc_2
Nitroreductase
APS_kinase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ACB43889
UniProt:
B1XU62
LinkDB
All DBs
Position
558437..560113
Genome browser
AA seq
558 aa
AA seq
DB search
MTALALARSWRPKTFSELVGQDHVVKALTHALDQGRLHHAWLFTGTRGVGKTTIARIMAK
ALNCTGADGSGKMTSEPCGKCPACMEIDAGRFVDYIEMDAASNRGVDDIASLLEKAAYAP
SNGRYKVYVIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTILSRCLQFNL
KQMPVPLIVEHLEKVLASEKMEYEVNALRVLAKAAQGSMRDALSLTDQAIAYAAGKVIEE
SVRGMLGTLDDAYLIRILDCLIAKDGASLLSVANEMGERSMFFSLALQDLSSLLQKIAVA
QVVPESVLDDWPEAGEIRRLAGQLTKEEAQLFYQITITSRPDLSLAPDEQTGFAMTLLRM
LAFRPGSGGGGGSSPAPSSPSASPVNTVRPATASAAPVARADAPAPASKAATPAAAPAFA
SSAPAAVASSAERPDWHALMRQLPVKGLVQQLAFQTELQDWNGEATGVRATIVTPMPQLA
SESSVGRLADALTVHFGKPVKIVIEKGEVEGKTVAKVDAQIHQEKRMNAEQMIAADPFIQ
QLEKEFGAKVVGGSVKPL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgacagcattggcattagcccgttcgtggcgccccaaaaccttctctgaattagtcggc
caagaccatgtggttaaggctcttactcatgccctagatcaaggccgtttgcatcacgca
tggctctttactgggactcgtggggtaggcaagacaactattgcccggattatggctaaa
gccctcaattgcactggagccgatggttcaggcaagatgacttcagagccttgcggaaaa
tgcccagcttgcatggaaatcgatgcaggtcgcttcgttgactatatcgagatggatgct
gccagtaatcgtggtgttgacgacattgcttctctattggagaaagcagcttatgcgcca
agcaatggtcgttacaaggtctacgtgattgacgaggtgcatatgctcaccaatcatgcc
tttaatgccatgctcaaaactttggaagaacctccagagcacgtcaaatttattctagct
actaccgatccgcaaaagatccctgtaaccattttgtctcgttgcttgcagttcaatctc
aagcaaatgccagttccactcatcgttgagcatttagaaaaagtccttgcctccgaaaaa
atggaatacgaagtcaacgccttacgtgtcttagctaaagcagctcaaggctccatgcgt
gacgccttatcgctcaccgatcaagctattgcttatgctgcaggcaaagttatagaagag
tctgtgcgcggcatgctcggcacattagatgatgcttatctcattcgtattctggattgc
ttaattgcaaaagacggcgcaagccttctctccgttgcaaatgaaatgggtgagcgcagc
atgtttttctcattggcattgcaagatctctccagcttgttgcaaaaaattgcagtagca
caagttgttccagagtcagtattagatgattggccagaagcgggcgaaattcgtcgctta
gctggtcaactcacaaaggaagaggcgcaactcttctatcaaattacgattactagtcgt
ccagatttatcgcttgcaccagatgagcaaaccggttttgctatgacgctgttgcgcatg
ctggcgtttcgtccgggtagtggtggaggaggtggctcttctccggcgccctcatcacca
tcagcctcaccagtaaatactgttcgtccagcgacagcttcggccgcacccgtagccaga
gctgatgcaccagcgcctgcttctaaagcagctacgcctgcagcggcgccggcattcgct
tctagtgcaccagctgccgtagctagctcggccgagcgtcctgattggcatgccttgatg
cgtcagttgccggttaaaggattggttcagcagttggcgtttcagacggaactacaggat
tggaatggtgaagcaactggagtgcgtgcaacgattgtgacgccgatgccgcagttagct
tcagagtcttcagttggtcgtttggctgatgcactcactgtccattttggtaagccagta
aagatcgtgattgaaaaaggtgaagtagaaggtaagaccgttgctaaggttgatgcgcag
attcatcaagaaaaaagaatgaacgctgaacaaatgattgctgccgatccatttattcag
caattagaaaaagagtttggtgccaaagtagtcggcggctcagtaaagcctctttga
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