Polynucleobacter necessarius: Pnec_0701
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Entry
Pnec_0701 CDS
T00683
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pne
Polynucleobacter necessarius
Pathway
pne03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pnec_0701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pne03400
]
Pnec_0701
Enzymes [BR:
pne01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Pnec_0701
DNA repair and recombination proteins [BR:
pne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Pnec_0701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ACB43931
UniProt:
B1XUA4
LinkDB
All DBs
Position
610384..611250
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AA seq
288 aa
AA seq
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MTDSVRIAAWNVNSLKVRLPQVLRWLQDQENKRQPIDALCLQELKLTDDKYPHKELEDAG
YLSLAAGQKTYNGVAIIVRKAALAPIASDTATSFLKPIRNIPNFKDEQQRILAATIPFAG
TPAMRLVSAYFPNGQSPDSDKFVYKLGWLKALHTWLGEELENNSRLALLGDFNIAPADED
VHDSKVWEGQSLVSPPEREAFQGLIKLGLNDSFRMFEQAPKVFSWWDYRMMGFRRNAGMR
IDHILLSEALKDQCIASTVDKEPRTWEQPSDHAPVIAEFKKPNKAVLS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgactgattcagtaagaatagccgcatggaatgtgaactctttaaaggttcgccttcca
caggtgctacgctggttgcaggatcaggaaaataagcggcagccaattgatgcgctctgc
ttgcaagagctcaagctgacggatgataagtatccacataaagagcttgaagatgctggc
tacttgagtttggctgccgggcaaaaaacctataacggtgtagccattattgtgcgcaag
gcggcactagcaccgattgcatctgacacagcaaccagctttctaaaacctattagaaac
attcccaatttcaaagatgagcagcagagaatcctggcggccacgattccttttgcggga
acaccggcgatgaggttggtctctgcatattttccaaatgggcaatctcctgatagcgat
aaattcgtatataaactcggttggcttaaggccttgcatacatggctcggcgaagagctg
gagaacaactcgcgcttagctctattaggcgactttaatattgctccagctgatgaggat
gttcatgattccaaggtctgggaagggcagagcctggtttcaccgccagagcgtgaagct
ttccaaggtttaatcaagcttgggttgaatgattccttcagaatgtttgagcaggcacca
aaggtatttagttggtgggactatcgcatgatgggcttcagaagaaatgcgggtatgcgc
attgatcatatcttgctcagcgaagcgctaaaagatcaatgcattgctagcacggtcgat
aaagaacctagaacttgggagcaaccttccgaccatgccccagtgatagccgaattcaaa
aaacctaataaagcagttctaagctaa
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