Polynucleobacter necessarius: Pnec_0817
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Entry
Pnec_0817 CDS
T00683
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pne
Polynucleobacter necessarius
Pathway
pne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pnec_0817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pne03019
]
Pnec_0817
03016 Transfer RNA biogenesis [BR:
pne03016
]
Pnec_0817
Enzymes [BR:
pne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Pnec_0817
Messenger RNA biogenesis [BR:
pne03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Pnec_0817
Transfer RNA biogenesis [BR:
pne03016
]
Prokaryotic type
tRNA degradation factors
Pnec_0817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
OB_RRP5_4th
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ACB44022
UniProt:
B1XUJ5
LinkDB
All DBs
Position
701984..704152
Genome browser
AA seq
722 aa
AA seq
DB search
MTMFKKAVKSFQWGTYQVTMETGEIARQAGGAVIVNVDDTVVMGTVVASKSAKPGQSFFP
LTVDYLEKTYAAGKIPGGFFRREGRPSEGETLISRLIDRPLRPLFPEGFLNEVQVVVHVL
SINPDVPSDIPALIAASAALAVSSIPFAGPVGAARVGYANGQYLLNPTRTEQATSELDLI
VAGTQAAVLMVESEANQLSEEVMLGAVVYGHDQMQTAINAINDLVCEAGKPEWDWTAAPK
DEPFIAKVTALAEAPLREAYQIRQKGARSDKLKEISKEVMAKLSEEGDVDAVAVSDIMFE
IEAKIVRSQILNGEPRIDGRDTRTVRPIEIRNGVLPRTHGSALFTRGETQALVVATLGTA
RDEQIIDVLEGEYRDRFMFHYNMPPFATGETGRVGSPKRREIGHGRLAKRALIPVLPSAE
DFAYSIRVVSEITESNGSSSMASVCGGCLAMMDAGVPVKAHVAGVAMGLILDGNRFAVLT
DILGDEDHLGDMDFKVAGTANGITALQMDIKVQGITKEIMQVALAQAKEGRLHILSKMQE
AMGSVRTELSAHAPRMVSFKIHPDKIREVIGKGGATIQALTKETGCSIDIKDDGTVTIAS
TSAEGMAEAKARIEGITAEAEVGKIYEGPVVKLLEFGALVNILPGKDGLLHISEISNERV
KEVKDYLAEGQVVRVKLLAADERGRLRLSLKAAMADEGGTIAPLAGAAEVATEAAPATGE
SA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgactatgtttaaaaaagcagtaaagagttttcaatggggcacctatcaggtaactatg
gaaacaggcgagattgctcgtcaagctggcggtgccgtaatcgttaatgtggatgacaca
gtggtaatgggtacagtagttgcctctaagtctgcaaaaccaggccagtcatttttccca
ttaactgttgattacctagaaaaaacctacgcagcaggcaagatccctggcggtttcttc
cgtcgtgaaggtcgtccatctgaaggcgaaactttaatttcccgtttaattgaccgtcca
ttacgtcctttattcccagaaggcttcttgaacgaagttcaggttgttgtgcatgtgctg
tctattaacccagatgtaccttctgatattcctgctttgattgctgcctctgcggcttta
gctgtttcaagtatcccatttgctggcccagtaggcgctgcacgcgttggttatgcaaac
ggtcagtacctcttaaacccaacccgtacagagcaagctactagcgaactcgacttaatc
gttgccggaacgcaagctgctgtattgatggttgagtctgaagcaaatcaattatctgaa
gaagtgatgttgggtgcagtggtttacggtcatgaccaaatgcaaacggctatcaatgca
attaacgacttagtgtgtgaagctggcaagccagagtgggattggactgcagctcctaaa
gatgagccatttattgctaaggtaaccgcattggctgaagcaccattgcgtgaggcatat
cagattcgtcaaaagggcgctcgttcagacaagctcaaagaaatttctaaagaagtaatg
gctaagttatccgaagagggtgatgttgacgctgttgctgtgagcgacatcatgtttgaa
atcgaagcgaagattgttcgtagccagattttgaatggcgagccacgtattgatggtcgg
gatactcgtacagttcgcccaatcgaaattcgtaacggcgtattgccacgcacacacggt
tcagcattgtttactcgtggtgaaacccaagcattggtcgttgcaacattaggtactgca
cgtgacgagcaaattattgatgtgctcgaaggtgaataccgcgatcgtttcatgttccac
tacaacatgcctccgtttgcaactggcgaaacaggtcgtgtaggtagccctaagcgccgt
gaaattggtcacggtcgtttggctaagcgcgctttaattccagtccttccaagtgctgaa
gattttgcatacagcatccgagtggtttcggagattactgagtccaatggctcatcttca
atggcttctgtttgcggtggctgtttggcaatgatggacgctggcgttccggttaaagcg
cacgttgcaggtgttgcaatgggcttgattcttgatggcaatcgttttgctgtattgaca
gacatcttgggtgatgaagatcacttaggcgatatggactttaaagtagcaggtacagct
aatggcattactgctttgcagatggatatcaaagtacaaggcatcactaaagaaattatg
caagttgctttggcgcaagctaaagaaggtcgtttgcatattttgagcaaaatgcaagaa
gcaatgggttcggttcgtacagaattgtcggcacacgctccacgcatggtttcattcaag
attcatccagacaagattcgtgaagtaatcggtaagggcggcgcaactattcaggcgttg
actaaagaaactggttgcagcattgacattaaagatgatggtactgtaacgattgcttct
acatctgctgaaggcatggctgaagcaaaagcacgaatcgaaggcattactgctgaagct
gaagtaggcaagatctacgaaggtccagttgtgaagttgcttgagttcggtgctttggta
aacatccttcctggtaaagatggtctcttgcacatctctgaaatttctaatgagcgcgta
aaagaagtgaaggactatttggcggagggccaagtggttcgcgtgaaattgttggccgct
gatgagcgtggccgtttacgtttgtcactgaaagctgcaatggctgatgagggcggcacg
attgctcccttagctggcgctgctgaagtggctacagaggctgctccagcgactggcgaa
tctgcttaa
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