Polynucleobacter necessarius: Pnec_0884
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Entry
Pnec_0884 CDS
T00683
Name
(GenBank) DNA-directed DNA polymerase
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pne
Polynucleobacter necessarius
Pathway
pne03030
DNA replication
pne03430
Mismatch repair
pne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pnec_0884
03430 Mismatch repair
Pnec_0884
03440 Homologous recombination
Pnec_0884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pne03032
]
Pnec_0884
03400 DNA repair and recombination proteins [BR:
pne03400
]
Pnec_0884
Enzymes [BR:
pne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pnec_0884
DNA replication proteins [BR:
pne03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pnec_0884
DNA repair and recombination proteins [BR:
pne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pnec_0884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
FSAF1
AAA_16
DNA_pol3_gamma3
HD_4
Motif
Other DBs
NCBI-ProteinID:
ACB44083
UniProt:
B1XUQ6
LinkDB
All DBs
Position
755985..757106
Genome browser
AA seq
373 aa
AA seq
DB search
MIQNTQLAPWHQPLWEGLDFDNFPNAILIHGQSGIGKFTFSVELAKVLLCENADATTKPC
NKCEACHWFDTGNHPDFISLVPETHRKLLPHADYDGDDSPKKAKATRDDESESSEKKEKK
NISIEETRHAIENLSIGSHRGGNRVILIYPLEMLRSDSANTLLKSLEEPPEKTIFILITD
RVDRVLPTIRSRCRLLTVPRPNREQGLAWLNVQLNQVTGLKASAADIEIIYDEQGGAPYL
VLNSLIARHNKDDKDELTASIQASRYLLQSMAQGVRLNWLDAAEKTHKAQYGFLLATMQR
WVSDLQLVAQGGTSRYYPKHLATLQELSKMVSIQKLHHFWKSLVQARRHENHPLANRIQI
EALLSQYQQIFSP
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
gtgattcaaaatactcaattagctccctggcatcaacccctctgggagggcttagatttt
gacaacttccctaatgccatattgatacatggacagtctggcataggtaaatttactttt
tcagttgaacttgctaaagtactgctctgcgagaatgcagatgccactaccaagccttgc
aataaatgtgaagcatgtcattggtttgatactggcaatcatcctgactttatttcgctt
gtgcctgaaactcatcgtaagctattgccacatgctgactatgatggcgatgattcaccg
aaaaaagcaaaagcaacacgcgatgatgaaagcgagtcgagcgaaaagaaagagaagaaa
aatatctctatagaggaaactcgacatgcaattgaaaatctatccatcggatctcatcgc
ggcggcaatcgcgtgatcttgatttaccccttagaaatgctacgctcagattctgcaaat
acattacttaagtctttagaggagcctcctgaaaagaccatttttatattgataaccgat
agagtagatcgtgtgttaccaactattcgttcacgctgtcgcctattaactgtccctcgt
ccaaatcgtgagcaaggcctagcctggttaaatgttcagttaaatcaagttacgggatta
aaagcaagcgctgcagatatagagatcatctacgatgagcagggtggggcgccttaccta
gttctaaattcattaatcgcaagacacaataaagacgataaggatgagctaactgcatcc
atccaggcttctcgctacttactccaatctatggctcagggggtcagactcaactggcta
gatgctgctgagaaaactcataaagcgcaatatggatttcttttggcaacgatgcagcgc
tgggtttcagatcttcaattagtggcgcaaggtggaacttcacgttattacccaaagcat
ttggctactcttcaagaactctcaaaaatggtgagtattcagaaactacatcacttttgg
aaatcactggtacaagctcgacgccatgaaaatcaccctcttgccaatagaattcaaata
gaggcactgctttcgcaatatcagcagatatttagcccataa
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