Polynucleobacter necessarius: Pnec_0979
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Entry
Pnec_0979 CDS
T00683
Name
(GenBank) HhH-GPD family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pne
Polynucleobacter necessarius
Pathway
pne03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pnec_0979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pne03400
]
Pnec_0979
Enzymes [BR:
pne01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Pnec_0979
DNA repair and recombination proteins [BR:
pne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pnec_0979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ACB44164
UniProt:
B1XUY7
LinkDB
All DBs
Position
complement(850306..850977)
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AA seq
223 aa
AA seq
DB search
MAVKEKSEAASESILQEVAPEYWEQACKELMKQDRILKKLIPKYGSGFLVTRGDPFNTLA
RAIVGQQISVAAAQSVWNKVVSACKKKVTPKNILALSSEELRAAGLSGRKVEYIRDLADH
FDSGRLHANQWKDMDDESVIKELSSIRGIGRWTAEMFLIFNMVRPNILPLDDVGLIKAIS
LNYFSGEPVSRHEAREVAANWAPWRTVATWYMWRSIDPIPVEY
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggcggtaaaagaaaaatcagaagctgcttcagaatcaattttgcaagaagttgcacca
gaatattgggagcaggcttgcaaagaattgatgaagcaagaccgcattctcaaaaaactc
attcctaaatatggttccggttttttagtcacgcgcggtgatccttttaatactttggcc
agagcgattgttggtcagcaaatttctgtagcagcagcacaatccgtttggaacaaagta
gttagcgcttgcaaaaagaaggtcacaccaaaaaatatcttggcgctctcctcagaggag
ttacgtgccgctggattatctggccgcaaagttgaatacatccgagatttggcggatcac
tttgattcagggcgcttgcatgccaatcaatggaaagatatggatgatgagagcgttatt
aaggaattaagctcaattcgggggattggccgctggactgcagagatgttcctcattttc
aatatggttcgccctaatattctccccctagacgatgttggtctaattaaggctatttcc
ctcaattacttcagtggggagcccgtcagccgccatgaagcgcgcgaggtggcagccaat
tgggccccttggcgtacggttgctacctggtatatgtggagaagtatcgacccaatccca
gttgaatattaa
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