Polynucleobacter necessarius: Pnec_1005
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Entry
Pnec_1005 CDS
T00683
Name
(GenBank) phenylalanyl-tRNA synthetase, beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pne
Polynucleobacter necessarius
Pathway
pne00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pne00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Pnec_1005
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pne01007
]
Pnec_1005
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pne03016
]
Pnec_1005
Enzymes [BR:
pne01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Pnec_1005
Amino acid related enzymes [BR:
pne01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Pnec_1005
Transfer RNA biogenesis [BR:
pne03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Pnec_1005
Prokaryotic type
Pnec_1005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
B5
FDX-ACB
Motif
Other DBs
NCBI-ProteinID:
ACB44186
UniProt:
B1XV09
LinkDB
All DBs
Position
complement(873512..875968)
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AA seq
818 aa
AA seq
DB search
MQFSESWLRQYVNPSLDSDGLGHVMTMAGLEVEEQHSVAPAFTKIVIAQILSAEQHPDAD
RLRVCKVDAGTGQELQIVCGAPNARAGIKIPCAMVGAELPPAEVGGKPFMIKVGKLRGVE
SQGMLCSGRELGLGDDHEGILELPTDAPVGKDIREYLNLDDQIFVIKLTPNKADCLSLMG
MAREVSAITGAALCGPEWTQPAVTIQDKLRVAIESKELCGRFAGRVIRGVNLQAKTPEWI
VQRLNRAGQRSISVLVDLSNYAMLEMGQPTHVFDIDKLNGDITVRWAKSGETLELLSGQT
VTLQGPDSAGRMQEAGVVADQNGPAALAGIMGGNHCAVTDDTKNVYVEAAYWLPSAIQGR
ARRFNFSTDAAHRFERGVDPQNTVNCLEYLSALIIEVCGGQAGPVDDQVLNIPERKSVKM
RLARAEKVIGIPLTNEIVADVFKRLGFEFKQEADVFIVTPPSYRFDIEIEEDLIEEVARM
YGFENIPDQPPVASLKMSAKAEAKRGIHLLRQRFALQGYQEAVNFGFTDLENEQRLAGAQ
EQDLIKVLNPIANRYGVMRSTLWGGLLGNLRANLNRGAGRVRLFEAGRVFKRDASALEEA
GKVAGFHQPQKIGGLAYGSFVPEQWANATRAVDFFDVKGDLERVLDPLQFVTEAAQHPAL
HPGRSAQVIMRAGKSNIVIGWIGELHPGLQQTYELPQAPVLFELDLDPIRELGLPVPEEL
SKFPAVQRDLALVVKQVVSVQSLLDAMAASKQNFVRKIEFFDEFKPKTGSSSMAEDEKSL
AFRVTLLNAQETLQDPQIDAVMAALLAAVEKKCAARLR
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttctgaatcttggctccgtcagtatgtaaacccatcacttgatagtgatggg
cttggtcatgtaatgactatggcgggtttagaggttgaagagcaacattcagtagcgcct
gcatttaccaagattgtgattgcacagatcctttctgctgagcagcatcctgatgcggac
cgtttgcgtgtttgtaaagtagatgccggtactggtcaagagttgcaaatcgtttgcggt
gcacctaatgcgcgcgctggtattaagattccttgcgctatggttggtgccgaactgcca
ccagctgaagtgggtggcaagcctttcatgattaaggttggcaagctgcgtggcgttgaa
agccagggcatgctgtgctctggtcgtgagctcggtttaggtgatgatcatgaaggtatc
ttagagttgcctactgatgcaccagttggaaaagatattcgtgaataccttaatctcgat
gaccaaatcttcgtcattaaattaacgccgaataaggctgattgcctctcattaatgggt
atggcaagagaagtatcagccatcactggcgctgcactctgcggacctgagtggactcaa
cctgctgtaacaattcaagataagcttagagtagctatagagagcaaagagctttgcggt
cgctttgctggtcgtgtaattcgtggcgtaaatctgcaagctaaaacccctgaatggatt
gtgcaacgtttaaatcgcgcaggccaaagaagtatttcagttttggttgatctatctaac
tatgcgatgttagaaatgggtcagcctacacacgtatttgatatcgataaattgaatggc
gatatcactgtgcgatgggctaagtcaggcgaaacacttgagttattaagtggtcagaca
gtgactttgcagggtccagattctgcaggaaggatgcaagaagcaggcgttgttgctgat
cagaatggtccggcagcacttgcgggcatcatgggtggcaatcattgcgctgtaactgat
gacactaagaatgtctatgttgaagcggcgtattggctgccttcagccattcaaggccgc
gctcgtcgctttaatttcagtacagatgcagcgcatcgttttgagcgtggcgttgatcca
cagaatacggttaattgcctggaatatcttagcgccttaattattgaggtctgcggtggt
caagcaggcccagtagatgatcaggttctcaatattccagagcgtaagtcagtaaaaatg
cgtttggccagagcggaaaaagtcattggcattccattgactaatgagattgttgcggac
gtattcaaacgtctcggttttgaattcaagcaagaagcggatgtatttattgttacgcct
ccaagctatcgttttgatattgaaatagaagaagatttaattgaagaagtcgcgcgtatg
tacggctttgaaaatattcccgatcaaccgccagtggcttcattgaagatgagcgctaaa
gcagaagcgaagcgtggcattcatttgctgcgtcaacgttttgctttgcaaggctaccaa
gaggcggtgaattttggttttacggatcttgaaaatgagcagcgccttgcgggtgcccaa
gaacaggatctgattaaggttctcaacccgatcgccaatcggtatggcgtgatgcgcagc
acattgtggggtggattgctaggtaacctcagggccaatttaaatcgcggagctgggcgt
gtgcgcttatttgaggctggacgcgtatttaaacgtgatgctagcgctctagaagaagct
ggcaaagttgcaggctttcatcagccgcaaaaaatcggtggcttagcttacggttcattt
gttccagagcaatgggccaatgcaacgcgtgcggtagatttttttgacgtgaagggtgat
cttgagcgcgttttggatccactgcaattcgtaacggaggcagcacagcatccagcactg
catcccggtcgttcggctcaagtaatcatgagggctggcaaaagtaatattgtgattggt
tggattggtgaattgcaccctggtctgcaacaaacttatgagttaccacaagcgccagtc
ttgtttgaattggatttggatccaattcgcgagctcggtttgcctgtgcctgaagaattg
agtaaattccctgcagtgcagcgtgatttggctttggtggtgaagcaagtcgtttctgtg
caatccttattggatgctatggctgcaagcaagcagaattttgtgcgcaagattgagttc
tttgatgagttcaagcctaagacgggctctagtagcatggcggaagatgaaaagagttta
gctttccgggtaaccctcttaaatgcacaagaaacattacaagatccccaaattgatgcg
gtaatggctgctttattggcggctgttgagaaaaagtgcgcagcgcgtctgcgctag
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