Polynucleobacter necessarius: Pnec_1230
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Entry
Pnec_1230 CDS
T00683
Name
(GenBank) transcriptional regulator, LysR family
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
pne
Polynucleobacter necessarius
Brite
KEGG Orthology (KO) [BR:
pne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pne03000
]
Pnec_1230
Transcription factors [BR:
pne03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Pnec_1230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Cro
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ACB44366
LinkDB
All DBs
Position
complement(1062739..1063407)
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AA seq
222 aa
AA seq
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MLNDELTLRKLEILCSFVRTGSLTRTAEELHLSSVSIHKALHSLESGIDCPLFVKEGRQL
KALPAALYLAEASADLLSDVDRILKKTRAKAGVESGQIRLGSMYSLTANIIPRIIMGTKI
RRPDLDVDLFLGSNEDLMKRLTEGTVDAVVIAVPSQNLPEGVQAVPLFEDQLYLASSKGN
KPTQTDIDLSEYQTKNFLLFKMALPLPLDSMRPFSWQDLSPM
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacgatgagttgacgctgcgcaagttagaaattctttgttcgtttgtgcggacg
gggagtcttacgcgaactgcagaagaattacatctaagttcagtcagcattcataaagca
ttacattctttagagtccggaattgattgccctttatttgttaaagagggtcgtcaatta
aaagccttgcctgcagcgctttatttggctgaggcaagcgcagatttattgtctgatgtt
gaccgaattctcaaaaagacaagagcaaaagcaggggtggagagcgggcagattcgcttg
ggctcaatgtactctttgaccgccaacatcattccccgcatcatcatgggtaccaaaatt
cgtcgtcctgatttggatgttgacctattccttgggtccaatgaggatttgatgaagcgt
ttgactgagggcactgtagatgcggtggtgattgccgtcccttcgcaaaatcttcctgaa
ggagtgcaggcggtccccctttttgaggatcagctttatctggcatcgtctaaaggcaat
aagcccacacaaactgatattgacttatcggagtatcaaacgaaaaatttcttactcttc
aagatggctttgccactacctctggattctatgaggcctttcagctggcaggatttaagc
ccaatgtag
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