Polynucleobacter necessarius: Pnec_1429
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Entry
Pnec_1429 CDS
T00683
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pne
Polynucleobacter necessarius
Pathway
pne03030
DNA replication
pne03410
Base excision repair
pne03420
Nucleotide excision repair
pne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pnec_1429
03410 Base excision repair
Pnec_1429
03420 Nucleotide excision repair
Pnec_1429
03440 Homologous recombination
Pnec_1429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pne03032
]
Pnec_1429
03400 DNA repair and recombination proteins [BR:
pne03400
]
Pnec_1429
Enzymes [BR:
pne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pnec_1429
DNA replication proteins [BR:
pne03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Pnec_1429
DNA repair and recombination proteins [BR:
pne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Pnec_1429
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pnec_1429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
ImpE
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ACB44527
UniProt:
B1XW00
LinkDB
All DBs
Position
complement(1225553..1228381)
Genome browser
AA seq
942 aa
AA seq
DB search
MTKHRLLLVDGSSYLYRAFHAMPDLRNGAGEPTGAIYGMVNMMRRTRSELKADHIACVFD
AKGKTFRDEMYSEYKAHRSPMPEDLVKQIEPIHAMVKALGWPVLMVGGVEADDVIGTLAC
QATQAGWETIISTDDKDLAQLVNSSVTLINTMTNEKLDIEGVKEKFGVPPELIVDYLSII
GDAVDNVPGVPKAGPKTANKWLAEFGSLDNLMANADQVKGVVGENLRASLDWLPQAHQLI
TVKTDCDLSPHLPGLDDLHAKSEDAPLLRELFERYAFKTWLRDVEKQLTSPADKASEVVT
FDLAGSPLTPSERGFDEEKKTRVIVSAPTKNLSQETRDSQDTIERRYECIVDIVGLEKWL
KKIESSQLTAVDTETTSLDAFAAELVGISLSVKPGEACYIPVAHRNGEAQLDRDLVLARM
KSWLESATHLKVGQNLKYDSHIFANYGITLKGVVFDTLLESYVLESHLPHNMDSLAERHL
GMKTIRYEEVCGKGVHQIGFDQVDLKIATDYAAEDADITLRLHLELWPQIQESPGLLYVY
EKVEMPAMRVLGIMERNGIRIDSALLAKQGQQVGKRLLELEGEIHKLAGQPFNIQSPKQI
AEILFGQLELPVIKKTPSGAPSTDEEVLQKLAEDYPLPARILDYRSLAKLMSTYIEKLPR
MADPKTGRVHTNFSQATAVTGRLASSDPNLQNIPVRTEEGRRIREAFIPAEGCKLLSADY
SQIELRIMAHIAEDENLLTAFRDGKDVHQATAAEIFGVPLDDVSSEQRRYAKVINFGLIY
GMSAFGLAGNLGIECSAAQNYIAKYFDRYPGVAQYMERTRLEARENGYVETVFGRRLWSP
EIKGSNGPRRQGAERAAINAPMQGTAADLIKLAMIAVEDWFEKEQLKTKMLLQVHDELVF
DVPLDEIELLQAKLPNLMCHVAQLKVPLAVSIGIGDNWEEAH
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgactaaacatagactcttgttggtagacggttctagttacctctatcgtgccttccat
gccatgccagacctcagaaacggggctggagagcctactggagctatttatggcatggta
aatatgatgcgccggactagatctgagctcaaagccgaccatatagcctgtgtttttgac
gccaagggcaagacctttcgcgatgaaatgtattctgaatacaaggcgcatcgctccccg
atgccggaagatttggtcaagcagatagagcccattcatgccatggtcaaagcgttgggt
tggccagtattgatggtcggtggtgttgaggcggatgacgttattgggactttggcttgt
caagcaacacaagcaggttgggaaaccatcatttccaccgacgataaagatttggcgcaa
ttggtaaattcttcagtcaccctcataaacacaatgactaatgaaaagttggatattgag
ggtgttaaagaaaagtttggcgtgccacccgagttaatagtggattatttatccatcatc
ggcgatgccgtagataacgtacctggtgttcctaaggcgggccctaagacagcaaataaa
tggttagcagaatttggcagtctcgataacttgatggccaatgctgatcaggtgaaaggt
gttgttggcgaaaatctgcgtgcctccctcgattggttgccacaggcacaccaattgatc
acagtaaaaacagattgtgatttatcgccacacttgcctggcttagatgatttgcatgcg
aagtctgaagatgcacccttgctgcgtgaattatttgagcgttacgcatttaagacttgg
ttacgcgatgtagaaaaacagcttacaagtccagcggataaggcttcagaggtggtgaca
tttgatttagcgggcagtccactcaccccttctgagcgtggatttgatgaagaaaaaaag
actcgtgtgattgtgagcgcaccaacaaaaaatttatcgcaagaaactcgtgactctcaa
gatacaatcgagcgacggtatgaatgcatcgttgatatagttggtttagaaaaatggttg
aaaaaaattgagtcttctcaattgactgcggttgacacagaaactacgagcttagatgcg
tttgcagcagaacttgttggtatttctttgtcggtgaagccgggtgaggcttgctacatt
ccggttgcacatcgtaatggtgaggcgcaacttgatcgcgatttggttctggcgcgtatg
aagtcttggttggagagtgcaacgcatttaaaggtggggcaaaacctcaagtacgactcc
catatctttgcaaactatggcatcacattaaaaggggttgtattcgataccttgcttgaa
tcttatgtccttgaatcgcatctgccgcacaacatggatagtttggctgagcgccatctg
ggcatgaaaaccattcgctacgaagaggtgtgcggaaaaggggttcatcagattggtttt
gaccaggtagatctgaagattgcgactgactacgccgccgaagatgctgacattaccctg
cgccttcatctagagctctggccccagattcaggagagtccgggcctactttacgtctat
gagaaggtagaaatgcccgctatgcgtgtgcttggcatcatggagcgtaacggtattcgg
atcgattctgcgttgctagccaaacagggtcagcaggttggtaaacgtcttttggagctt
gagggtgaaatccataagctggcaggtcagccgttcaatattcagtcacccaagcaaatc
gccgaaattttgtttggccaacttgagttaccggtgattaaaaagacgccatctggcgcg
ccatctacggatgaagaagtgttgcagaagttggctgaggactacccgcttcccgcacgt
attttggattaccgcagtttggcaaagctgatgtcgacctatatcgaaaagctgccgcgt
atggctgatcctaaaacgggtcgagtccatactaacttttcgcaagctactgccgttact
ggccgcctagcttcaagtgatccgaacttacaaaatattcctgtgcgcaccgaagaaggt
agacgcattcgggaggcatttattccagcggaaggttgcaagctattatcagctgactac
tctcaaattgagctacgcatcatggcgcatatcgccgaagatgaaaatctcttaactgct
tttagagatggtaaggatgtgcaccaggctactgcagcagaaatctttggcgtacctttg
gatgatgtgagttcagagcaacgtcgttatgccaaggtaattaactttggactcatttac
ggcatgagtgcttttggtttggcgggtaacttaggtattgagtgctcagccgcgcaaaat
tacattgctaaatactttgatcgatacccgggggttgctcaatacatggagcgcactcgt
ctcgaagcaagagagaatggttatgtagagactgtctttggccgccgtctttggtcgcct
gaaataaagggctctaatggacctcgtcgccaaggtgcagagcgcgcggcaattaatgct
ccaatgcaaggaactgctgcagacctaattaaattagccatgattgccgttgaggattgg
tttgaaaaggagcagttaaaaaccaaaatgctgcttcaggtgcatgatgaattggtcttt
gatgttcctttagatgagattgaattgctgcaggctaagctgcccaatttgatgtgccat
gtagctcaattaaaggtgcccttggcggttagtattgggattggcgataattgggaagag
gcgcactaa
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