Polynucleobacter necessarius: Pnec_1433
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Entry
Pnec_1433 CDS
T00683
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pne
Polynucleobacter necessarius
Pathway
pne03420
Nucleotide excision repair
pne03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pnec_1433
03430 Mismatch repair
Pnec_1433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pne03400
]
Pnec_1433
Enzymes [BR:
pne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pnec_1433
DNA repair and recombination proteins [BR:
pne03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pnec_1433
MMR (mismatch excision repair)
Other MMR factors
Pnec_1433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACB44531
UniProt:
B1XW04
LinkDB
All DBs
Position
complement(1230651..1233017)
Genome browser
AA seq
788 aa
AA seq
DB search
MYSDLLANLNPEQREAVTLPPVNENGQSQSALILAGAGGGKTRVLTTRIAWLIQTGQVSP
IGVLAVTFTNKAAKEMMLRLSAMLPINTRGMWIGTFHGLCNRLLRAHHKEAGLPSTFQIL
DTQDQLSAIKRLLKGLKVDDEKYPAKQLQYFIAHAKERGQRAKDLSVGDDFQAKMAQLYA
AYDEQCQREGVVDFAELLLRSYELLKHSEAIRTHYQERFRHILIDEFQDTNALQYAWLKL
LSGHDASSINVSGMGSSSVFAVGDDDQSIYAFRGADVENMRLYEKQYHPLMVKLEQNYRS
HGHILDTANHLIANNSERLGKNLRTDADHGEPVRIYEAPSDHAEAAWLVDEIKALVNSGI
KRTEVALLYRSNAQSRIIEHALFSAGIPYRVYGGLRFFERAEIKHALAYSRLLENPNDDT
SFSRVVNFPTRGIGARSIEVLQDAARAQQCSLYLAASTLEGKAGAALGGFVRLVDHMREA
TRHNTLPETVEFVIQHSGLIQHYLSEREGQDRVENLQELINAATAFIAEEGYGQDAAAAM
LSGENAPGVAEVSPLAAFLSHASLEAGDNQAQAGQDAVQLMTVHSAKGLEFTSVFITGLE
EGLFPHENSVNEQNGLEEERRLMYVAITRAKERLYLSHTQSRMLHGQVRYNMPSRFLEEL
PSDSLKWLTPKARDARWGGGNLRSGSTRQDGYTRQREYESNDFFDSGSDHQRPAKRVGSA
SMEVKRLISPPRGNYPFTIGQNVFHTKFGEGHVTGLEGVDADARAQVNFKRHGIKWLQLS
IAKLVAID
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtactcagacttgctcgcgaacctcaatccagaacagcgcgaggcagtgaccctcccg
cccgtcaatgaaaatggccaatcccagtcagccttgattttggcaggggcagggggtggc
aagacccgcgtcctcaccacccgtatagcgtggttgattcagactggccaggtgtcccca
ataggcgtactagcggtgacctttaccaataaagctgccaaagagatgatgttgcgctta
agcgccatgctgccaattaatacccgtggaatgtggattggtacttttcatgggctttgt
aaccgtttattgcgtgcccaccataaagaggcgggcctgccctcaactttccagattttg
gatacccaagatcaactctcagcgattaaacgtttgttgaagggtttaaaggttgatgat
gagaaatatcctgctaagcaattgcagtactttattgcccacgctaaagagcgcggacag
cgtgcaaaagatttatcggtaggcgatgactttcaggccaagatggcgcagctctatgca
gcttacgatgagcaatgtcagcgtgaaggcgtagtcgattttgctgagctcttattacgt
agctatgaattgctcaaacatagcgaggctattcgcactcattaccaggagcgcttccgc
catatcttgattgacgagtttcaagatacgaatgccttgcaatatgcatggctcaaatta
ttgtcgggtcatgatgctagcagtattaatgtgagcggtatgggtagtagttccgtattt
gcggtaggcgatgacgaccaaagtatttatgctttccgcggcgctgatgttgaaaacatg
cgcttgtatgaaaagcaataccacccattgatggtgaagttggagcagaattatcgttca
cacggccacattctagatactgcaaatcatttgattgctaacaactcagagcgtcttggt
aaaaacctccgcaccgatgccgaccatggcgagccagtccgtatctatgaggcgcctagc
gatcacgctgaggccgcttggttggttgacgagattaaagcactggtgaacagcggcatc
aagcgtaccgaagtggccttactttatcgcagcaatgcccagtcacgcatcattgagcac
gcactattttctgcgggcattccatatcgtgtatatggtggtttacgctttttcgagcgt
gctgaaattaaacatgcactggcttattcgcgcttgcttgaaaatccaaatgacgacacc
tcattctctcgcgtggttaattttccaactcgtggaattggcgcgagatcaattgaagtc
ttgcaagatgctgccagagcacagcaatgttccttgtatcttgcagcctctacattagaa
ggtaaggctggcgcagcgctcggtggatttgtgcgtttagtggatcacatgcgtgaagca
acgcgccataatactttgccagaaacggttgagtttgttattcagcacagtggtttgatt
cagcactatctctctgagcgcgaaggacaagatcgcgtagagaacttgcaggaattaatt
aatgcagcaactgcatttattgctgaagagggatatggtcaagatgcggctgctgcaatg
ctgtcaggcgagaatgcccctggcgttgcagaggtttctccactagctgcattcctgtcg
cacgcttccttggaagctggcgataaccaggcacaggctggtcaagatgctgtgcagctg
atgactgtccattcagctaaagggctggaattcacctctgtcttcattactggcctcgaa
gagggtttatttccgcatgagaacagcgttaatgaacagaacggtctagaggaagaacgt
cgcttgatgtatgtcgcaattactcgcgccaaagagcgtttgtatttatcgcacacccaa
tcacgcatgttgcacggccaggtacgctacaacatgccttcgcgcttcttagaagaattg
ccatcagattcattgaagtggctcacacccaaagcgagagatgctcgttggggtggtggt
aatttaagatcaggatcaactcggcaggatggctatacccgtcagcgcgaatatgagtcg
aatgacttttttgattcaggatctgatcaccagaggcctgctaagcgtgtcggctcagct
tcgatggaagtaaaaagattaatctctcctccgcggggaaattatccattcaccattgga
caaaatgtgtttcataccaaatttggtgaggggcacgtaactggcttagagggtgttgat
gctgacgcaagagcacaggtgaatttcaaacgtcatggcatcaaatggttgcaactaagt
attgcgaagcttgtggcgattgattga
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integrated database retrieval system
