Polynucleobacter necessarius: Pnec_1584
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Entry
Pnec_1584 CDS
T00683
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pne
Polynucleobacter necessarius
Pathway
pne03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Pnec_1584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pne03400
]
Pnec_1584
Enzymes [BR:
pne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pnec_1584
DNA repair and recombination proteins [BR:
pne03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pnec_1584
RecFOR pathway proteins
Pnec_1584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
nSTAND3
AAA_22
AAA_14
Rad17
AAA_3
NTPase_1
AAA_18
TsaE
RNA_helicase
AAA_33
DUF815
AAA_17
Sigma54_activ_2
AAA_24
ABC_tran
AAA_28
NACHT
IstB_IS21
NB-ARC
AAA_25
bpMoxR
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ACB44661
UniProt:
B1XS26
LinkDB
All DBs
Position
1383868..1384938
Genome browser
AA seq
356 aa
AA seq
DB search
MAIHTDNLSSIPEDLPEGNDRIVSGSAGNAEAVFERALRPKQLNEYVGQTKARAQLEIFI
SATRARQEALDHVLLFGPPGLGKTTLAHIIARELGVNLRQTSGPVLDRPGDLAALLTNLE
ENDVLFIDEIHRLSPVVEEILYPALEDYSLDIMIGEGPAARSVKIDLKPFTLIGATTRAG
MLTNPLRDRFGIVARLEFYTTKELTKIINRSTSLLKADIDPDGSIEIAKRARGTPRIANR
LLRRVRDYAEVKGTGTITKAMADAALKMLDVDPSGFDVMDRKLLEAILHKFDGGPVGIDN
LAAAIGEERDTIEDVLEPYLIQQGYLQRTSRGRVATRQAYEHFGLTPPSGSASLDI
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcaattcacacagacaacctgagctcaattcctgaagatttacctgaagggaatgac
cgcattgtgagcggctcagccggtaatgctgaggccgtctttgaaagagcgctgcgccct
aagcaactcaatgagtatgttggtcaaactaaagcacgtgcccaattagagattttcatt
agcgctacaagagcacgccaagaagctttagatcacgttctcttatttggacctcctggc
cttggtaaaaccacattggcccacatcattgccagggaacttggtgttaacttgcgtcaa
accagtggtcctgtgctagataggcccggcgatcttgctgccctactaaccaatctagag
gaaaacgatgtcctctttattgatgagattcatcgtctctctccagttgtagaagaaatt
ctttaccctgcgcttgaagattacagtctagacatcatgattggcgaaggtcctgcagca
cgcagcgtcaaaattgatcttaagcctttcacattgattggcgcaactactcgtgccggc
atgctcaccaatccattgcgtgatcgttttggcattgtggcaagacttgagttctatacg
actaaagaactcaccaaaattattaatcgctcaaccagtctactcaaggctgacattgat
cctgatggctcaatcgaaatcgccaagcgtgctcgtggcactcctcgtattgctaaccga
ttactacgtcgtgtacgcgactatgcagaagttaaaggtacaggcacgattactaaagcc
atggcagatgcagctctcaagatgctagatgtcgatccaagcggttttgatgtgatggac
agaaaattactggaagccatcttgcacaagttcgatggtggaccggtgggtattgataac
ttagccgcagccattggcgaagaacgtgacactattgaagatgttctagagccgtatctg
attcagcaaggctacctacaaagaacctcgcgtggaagggttgctactcgccaggcctat
gagcactttggcttaacaccgccaagtggcagcgcaagcctagatatttaa
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