Pelagibacterium nitratireducens: V6617_00040
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Entry
V6617_00040 CDS
T11031
Name
(GenBank) transglycosylase domain-containing protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
pnf Pelagibacterium nitratireducens
Pathway
pnf00550
Peptidoglycan biosynthesis
pnf01100
Metabolic pathways
pnf01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V6617_00040
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V6617_00040
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pnf01003
]
V6617_00040
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pnf01011
]
V6617_00040
Enzymes [BR:
pnf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
V6617_00040
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
V6617_00040
Glycosyltransferases [BR:
pnf01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
V6617_00040
Peptidoglycan biosynthesis and degradation proteins [BR:
pnf01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
V6617_00040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
WWT32907
LinkDB
All DBs
Position
9514..11667
Genome browser
AA seq
717 aa
AA seq
DB search
MDLRLSPDDRVDGGPQRKARGQRAQAGSGSNGPKGGKPRRPQNRKVKKKRSGGMRFIVGF
AYFCFTMLLLGGVAVAGIVVYYGQDLGSSSTWEVPQRPPNIRVLASNGQLLTNRGQTGGE
AVGIHELPPYVGQAVVASEDRRFYSHFGVDPIGLASVGIEMIRAGGITRGASTITQQVAK
NLFLTPDQTLGRKVQEALLAVWLEQNYSKDQILELYLNRVHFGSGSTGIEAAAQTYFGIS
ARNLSLGQAAMLAGILPAPSYYNPRTHPDRAAERQRLALANMVREGYITEQEAHAAAQNM
DANITTERVAGTEYYVADWVESLMNDYLGEVNEDVVVSTTLDWDMQKQAEFVIKEAVASQ
GEDLDFSQAAFVAMDTEGRVRALVGGVDYSQSSYNRAVTSRRQPGSAFKPFVYLAALQQG
YTPDTLMVDEPLDYEGWQPENSNGRYVGPVLLRDALAFSINTVSARLAIDIGPENVVETA
YRMGFSTNFQPVPSIALGTQEVSLLELTSAYAPFANGGYGVVPNVITRITTTDGEVLFEE
TPAGPGRILTDEQVGMMNDMLQTGVQAGTGTRAQLGNWPMAGKTGTTQRNRDALFVGYTA
SLVGGVWLGNDDDTPTRVFGGQIPAQIWRDIMAEAHEGLQSAALPGNYVKLQDRVAVPMQ
DTMPATGTPVTIDQIQGQPGQQPAPLPQQQIQPQQQQPVAVPADDGIGGLLNGLFGE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggatcttcgtctctctcccgatgatcgcgtcgatggcggcccgcagcgcaaggccagg
ggccagcgcgcgcaggccggatcaggctccaatgggcccaagggtggcaaaccccgccgg
ccgcagaaccgcaaggtgaagaaaaagcgctcgggcgggatgcggtttatcgtgggattt
gcgtatttctgcttcacgatgctgcttttgggcggcgtcgcggtggccggaatcgttgtc
tattacgggcaggatctgggatcgtcctccacctgggaagtgccccagcgtccgcccaat
attcgggttctggcgtccaacgggcagcttttgaccaatcgggggcagaccggcggggag
gccgtgggcatccacgaattgccgccctatgtgggccaggccgtggtggcgagcgaagac
agacgcttttacagccatttcggggtcgatccgatcgggctggcctcggtggggatcgaa
atgatccgcgcgggcggcatcacccgcggcgcctccaccatcacccagcaggttgccaag
aatttgtttctgacccccgaccagacgcttggccgcaaggtgcaggaagcgcttctggcg
gtgtggctggaacagaactattccaaggaccagatcctggagctttatctcaaccgcgtg
catttcgggtcgggttcgaccggaatcgaagctgcggcgcaaacctatttcggcatttcg
gcgcgcaatctctcgctgggtcaggcggccatgctggccggcattctgcccgcgccgagc
tattacaacccgcgcacccatcccgaccgggccgccgagcggcagcggctggcgctggcc
aacatggtgcgtgagggctacatcaccgagcaggaggcccatgccgctgcccagaacatg
gatgccaacatcaccaccgagcgggtggcgggcaccgaatattacgtcgcggactgggtg
gaatcgctcatgaacgactatctgggcgaggtgaacgaggacgtcgtggtttcgaccacg
ctggactgggacatgcaaaagcaggccgaattcgtcatcaaggaagccgtcgcctcacag
ggcgaggacctggacttttcccaggcggcctttgtggccatggacaccgaaggccgggtg
cgtgccctggtgggcggggtcgattacagccaatcgagctacaaccgcgccgtgacctcg
cgtcgtcagccgggatcggccttcaagccctttgtctatcttgccgccctgcagcagggc
tatacgcccgacacgctgatggtggacgagccgctcgactatgagggctggcagccggaa
aactccaatggccgctatgtcgggccggtgctgttgcgcgacgcgctggccttttccatc
aacacggtatcggcgcgcctggccatcgatatcgggccagaaaatgtggtggagacggcc
tatcggatgggcttttccaccaatttccagccggtgccctcgatcgcgctgggcactcag
gaagtctcgctgctcgagttgacgagcgcctatgccccgtttgccaatggcggttatggg
gtggtgcccaatgtgatcacgcggatcaccacaaccgatggcgaagtgctgtttgaagaa
acgccagccggaccgggccgtatcctgaccgatgagcaggtgggcatgatgaacgacatg
ctccagaccggcgttcaggccggaacgggcacgcgggcgcaactgggcaactggccgatg
gccggcaagaccggtacgacccagcgcaaccgcgacgcgctgtttgtcggttacaccgca
agccttgtgggcggcgtgtggctgggcaatgacgacgacaccccgacccgggtgttcggc
ggacagataccggcccagatctggcgcgacatcatggccgaagcccatgagggcctgcag
agcgcggcgctgcctggcaattatgtcaagctccaggaccgcgtggcggtgccgatgcag
gacaccatgccggcgaccggaacgcccgtcacgatcgaccagatccagggtcagccgggt
cagcagcctgccccgttgccccaacaacagatccagccgcaacagcagcagcccgtggcg
gtcccggccgatgacgggatcggcggcctgctcaacgggctgtttggcgagtag
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