Pelagibacterium nitratireducens: V6617_00160
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Entry
V6617_00160 CDS
T11031
Name
(GenBank) glycoside hydrolase family 43 protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
pnf Pelagibacterium nitratireducens
Pathway
pnf00520
Amino sugar and nucleotide sugar metabolism
pnf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
V6617_00160
Enzymes [BR:
pnf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
V6617_00160
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
Glyco_hydro_32N
Motif
Other DBs
NCBI-ProteinID:
WWT34724
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Position
38468..40045
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AA seq
525 aa
AA seq
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MRQNPILPGFNPDPSICRVGEDYYIATSTFEWFPGVQIHHSKDLANWALLTRPLTRKSQL
DMRGNPDSCGIWAPCLTHDGEKFWLVYTDVKRKDGNFKDAHNYIVTADEITGPWSEPIYV
NSSGFDPSLFHDDDGKKWFVNMLWDHREGYHRFAGIALQEFDPVAGRLVGERKNIFKGSP
LKLVEGPHLYRRDGWYYLLTAEGGTGYEHAATLARSRNIDGPYELHPDMYLVTAKDNPLN
PLQRAGHGDIVETPDGQTYLVHLTGRPTTQKRRCVLGRETALQKCEWRADGWLYLVGGTN
LPASEVNVPGTYDQAGFDAERRYGFDGELHIDFQWLRTPEPERIFRLEGGKLILIGRESI
GSWFEQALVARRQTHFDFEAETEVSFEPRDEREMAGLTGYYGRYNFHYLHLTADPDGQRE
LNIFSSVVSHPDGKLTYWIDPVPVGVGPVRMKMRVENSALQYFYAQESDDWQKIGPELDA
SILSDECGGHAEHGSFTGAFVGMAAQDLNGTSREAGFSHFVYRPL
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
attcgccaaaacccgattctgccggggttcaatcccgatccctcgatctgccgcgtcggg
gaggattattacatcgccacctcgaccttcgagtggtttcccggggtgcagatccatcac
tccaaagaccttgcgaactgggcgcttctgacccggccgctcacccgcaagagccagctc
gacatgcgggggaaccccgacagctgcggcatctgggcgccatgccttacccatgatggg
gaaaaattctggctggtctataccgacgtcaaacgcaaggacggcaatttcaaggacgcg
cataattatatcgttacggccgatgagatcaccgggccgtggtcggagccgatctatgtc
aattcgtcggggttcgatccgtcgctgtttcacgacgatgacgggaaaaagtggttcgtc
aacatgctgtgggaccaccgggagggatatcaccggtttgcggggattgcgcttcaggag
ttcgatccggtggcgggcagattggtcggggagcggaaaaacatcttcaagggctcgccg
ctcaagctggtcgaggggccgcatctctataggcgcgatggctggtactatcttctgacc
gccgagggcgggaccggatacgagcatgcggctacactggcgcggtcacgcaatatcgac
gggccatatgagctgcatcccgacatgtatctggtgacggccaaggacaatccgctcaat
ccgctgcagcgggccgggcatggggatatcgtggaaacccccgatggccagacctatctc
gtgcacctgaccgggcggccgacgacccagaagcgccgctgcgtgctggggcgcgaaacg
gcgctgcagaagtgcgaatggcgtgcggacgggtggctgtatctggtgggcggcacgaat
ctgccggcctccgaagtgaacgtgccggggacctacgatcaggccgggttcgatgccgag
cgacgctatgggttcgatggcgaattgcacatcgattttcaatggctgcggacgccggag
ccggaacggattttcaggctcgagggcggaaagctcatcctgatcgggcgggaatcgatt
ggctcttggttcgaacaggcgctggtagcacggcgacagacccatttcgatttcgaggcg
gagaccgaagtgagcttcgagccgcgcgacgagcgcgaaatggctgggctcaccgggtat
tatgggcggtacaatttccattacctgcacctgaccgccgatccggacggacagcgcgag
ctcaatatcttttcctcggtggtgagccacccggacgggaagctgacctattggatcgat
ccggtgccggttggggtcggtccggtgcgcatgaagatgcgggtggagaactcggcgctg
cagtatttctatgcgcaggaatcagacgactggcagaaaatcgggcccgaactcgacgcc
tcgatcctgtcggacgaatgcggcggccatgccgagcatggcagctttaccggggcgttc
gttgggatggcggcgcaagatctcaatgggacgtcgcgcgaagcgggcttttcccatttc
gtctatcggccgctgtaa
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