Pelagibacterium nitratireducens: V6617_01755
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Entry
V6617_01755 CDS
T11031
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pnf Pelagibacterium nitratireducens
Pathway
pnf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6617_01755
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnf02000
]
V6617_01755
Transporters [BR:
pnf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
V6617_01755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WWT33220
LinkDB
All DBs
Position
343831..345387
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AA seq
518 aa
AA seq
DB search
MTLQRKTLTAALASCLAFAVGSTHAQTPEPEATLGGELRVGIARDVVNMVPWVAQGASVY
IVQQNVYDNLITYDDEGNLTGELAESWEIVDPTTYVLKLRQNVVFHDGDTFDAEDAKVSL
DRMRDPTGTSALASQLSSIAEVNVIDPYTIELKLSEPNVVVLSILASSTAHVLSKEWLET
EPDLTTEMNGTGPFMFIEFEPGVRTVLERNPNYWKEGLPYLDRLVAIPYADDSSRINALR
SGEVNFIEYVPYVEFDSLRQDDQFDLQSGVGPYNILVLNINEEPFDDIRVRQALNYLIDR
EQLIMLVSEGEGTPMQVGLLQPDDPFYSADLETWTFDPDRALELIQEAGYDGFSDIGFTL
TSSTVTIHQDMATVVQALLQGFGMNVSIEIVDVPTLLEYRGNGAYVAMMDGYSNAYQDPD
AYSRYFETGGAGYANAVGLSDEILDEMIDRGRAATDVAERKEAYHEFEERLIELAPWYFG
FFRPQGEAMIQDVNGYRRWPSGLGGQSTSRMEYVWIQQ
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgactcttcaacggaagactcttaccgccgcacttgcttcctgcctggcatttgccgtc
ggcagcacgcatgcgcagaccccggagcctgaggctaccctcggcggggaattgcgggtg
ggtatcgcccgcgacgtcgtcaatatggtgccgtgggtcgcgcaaggggccagcgtctat
atcgtccagcaaaacgtctacgacaatctgatcacctacgacgatgaagggaacctgacg
ggagagctcgctgaatcctgggagattgtcgacccgacgacatatgtgctcaagctgcgg
cagaacgtcgtcttccacgacggggataccttcgatgccgaggatgcgaaagtgtcgctg
gaccgaatgagggatcccaccggcacctctgcgctggcctcacaactatcctcgatcgca
gaggtcaacgtcatcgatccctatacgatcgaactgaaactgtccgagcccaatgtcgtc
gtactgtctatcttggcgtcatcgacggcgcatgtcctgagcaaggaatggctcgaaacc
gagcccgacctcacgaccgagatgaacgggacgggccccttcatgtttatcgaattcgag
ccgggcgtccggaccgttctcgagcgcaatcccaactactggaaagaagggttgccctat
ctcgaccggctcgtggccattccctacgcggatgacagctcgcgcataaacgctctgcgc
tcgggcgaggtcaatttcatcgagtacgttccatacgtggagttcgattcccttcgtcaa
gacgatcagtttgatcttcaatcgggtgtcgggccgtacaacatccttgttctgaacatc
aatgaagagcccttcgacgatatacgggttcgtcaggccctgaactacctcatcgaccga
gagcaactcatcatgctggtttcagaaggcgaaggcacaccgatgcaggtcggactgctc
cagccggacgatcccttctacagcgcagacctcgagacttggacattcgatcccgatcgc
gcgctcgaactcatccaggaggccggctacgacgggttctccgacatcgggttcaccctt
acgtcgtccacggtgacgatccaccaggacatggcgaccgtagtgcaggctctcctgcaa
ggcttcggtatgaacgtctcgatcgagatcgtcgacgtaccgactcttcttgagtaccgc
ggaaacggcgcctatgtcgccatgatggacggctattccaacgcgtaccaagatcccgat
gcctactcccggtatttcgagacgggcggcgccggatacgctaacgccgtcgggctctcc
gacgagatactcgatgagatgattgaccggggtcgtgccgcaaccgatgttgcagaacgc
aaagaggcctatcacgagttcgaagaacgacttatcgaactcgccccctggtacttcggc
ttcttccgtccgcaaggcgaggccatgatccaggacgtgaacggctacaggcgttggccc
agcgggctcggtggtcagtccaccagccggatggagtacgtctggatccagcaataa
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